Gene detail

Detailed information of alvinactis_v1_g13881 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_7:684809...699306
NR annotation: XP_028517380.1, apical junction molecule isoform X2 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g13881

ATGGCGACTGGATCTTTAGCCTCTATtgctgattatgaagatgatgatactgatgcagatgatgaAACAACTGTTGATTGGAATATAAAGGGAACTCATTTAAGGGGAAGATTTACCATCTCACAAGATGGTCTATGTCCTCGATGTGAAACTAGCAGTGTTGTATTTGTTATTGTTGATGAGTTATTCCCAATGGGTGATATGCCTGAGATACTGTGTACTCTCATAGCAAAGGGCAAGGCTGTGTTATGGTCTAGTCAAAACAAGAAAGGTTGTAAGGCCCCTCCTACTTTTTTATGCCGAGGGTTTTGTCCACCTGATCCTCTTGGAGCAGGATTTAATGTGAACTGGAGCAATGTTTCCTTGCAAGACCTCTTTTTTTCATCACAACCAAGAAATGCAAACACTGGTCCAACTGTACAGCAAGAAGGAGAATCAAAAgatgaaaattatgatgtggagtatggagaaaatggcagtgatgatgatgatgatgatgatcttgatgaagatgaGTTAATAAAACAAATGTTAGCCAAAGAAGCACAAAAGACACCACAAGAGGATATAACAGAAGAGACAGAAAACCAACCAAGTTATGAGAGTGAAACACCCCAACCTGATGATACCATTCCTCCTCATCTTAGAACAACACACACTGTTTATTCAACACAGAGCACATCAAGTAGTGTTCAGTCATCAACCAATACTTCTACAATAGAATCACAAGATAAAAGTTTTCAGTATCCTGTGTCTAGTGACGGCGGCTGTCCTTATTGTTACTCTAAGAATGTTAAATACATCATTGTCTTTGCTGATGGCATGCGTGATGGAGACCTGCCTTTCACACTGCGTGAACTCATTAAAAGAGATCAAGCTTTCAAGATGGCAAAAGGAACAAATGATCCCCCATCATTTCAATGCCAAGTCTGTCATTATGGCTTTAACTTAGACTGGTCATCCACAAACTTGGAACTCATCTTTGGGATTGCTAAAGGAGGCTCTACTGAAACATCAAATACCACAACAACAAGTACATCAAGTGTTCCTCCACCACGGGTACCACCCCCAACAAGATATCAACCCCCCTTTCCACCTCCAGGTCTACCTCCACGTCCAGGAATGCCGCCTCCAAGAATGCCTCCCCATGGAATCCCACCACCAAGAATCCCACCTCCACGGATGTcaccaagactaccaccaccaagagttccaccaccTGGTTTTTCACCCCCTCGTGCCTTTCCTCCTGGGCCACGCGGAATACCTCCACCAGGTTGCCCTGCAGTTCCACCACCACCTGGACATGTCCCACCCAGAGTGccacctcctaggattccaccacccagagtaccacctcctagggtaccacttcctagggtaccacctcctagggtaccacttcctagggtaccacctcctagggtaccacctcctagagtaccacctcctagagtaccacctccAATGAATATACCACCCAGGGCTCCTCCACCATATGGTGGGGGACTACCACCCAGGTACCCAAGACCTCCTTATCAGTATGGGCATCATCCACATCATCCACACCACAGACCACCACCAGGCCCACCTATGTATGGGAGATATGCAGACTATGGTTACCATGACCCTTACTACccaccaccaatgccacccataccaccaccaccaTTTGGTCACTATCCTCACCATCCACGAGGATACCCACGACCCTTCCCTCCACCTCCAGTACCAGAGTACCACTACAATTACCCACCACCATCAGTACCAGCACCCCCAGGAACATACCCAGCAAGACCTTACCCAGTATCTAGGTTCTCCAGTAATACACATGTTACTCAAGACACCCCAATCACTTCTGATGTTACTGAGAACAATGATGTTGATGAAGCTAAATCACTAGAAGATTCACACAGACTTGAAGAATTGTTGAACCAGATTGACAAGGTTCGAGGTGAAGGACAAGAAACAGATGATAACATGAGTAGTGAAGAACCAAACTCGTTTAGTGAAGAACAGGTTGATGACAGAACAGCAGGGGATGGTATTCAAGACACAGAACCAACTGAACCAACAGCAGAAATTACtgttggtgaagacgaagtgacacaacgcacagtaactgatgatacagatgacaatgttggtgaagaagaagtgacacaacgcacagtaactgatgatacagacggcaatgttggtgaagacgaagtaacacaacgcacagtaactcatgatacagacgacaatgttggtgaagacgaagtgacacaacgcacagtaactgatgatacagatgacaatgttggtgaagacaaagtgacacaacgcacagtaactgatgatacagatgacaatgttggtgaagacaaagtgacacaacgcacagtaactgatgatacagatgacaatgATTCCAGTGAAGATCAATTTGTGACACCATGTGAGAGTGCTAGTGATTTACTTACTACCGATAAACCTAGCACATCTAAAGAAACTGAGCAATCAAGCGATGCTCTCACTACTATACAAACAATATCACCCAGGACTAAGCAAGGCCGCAAGAGAAAAGCTCCATCCAAAACAGACGAAGATGAGGAAGACGAGAATACTAAACAACAGAAAGTCACAGATGACAGTTCACAGGAAGAACTTACTGTAGAATTAGACGTCAAAAGAACAATCACTACGAAACCAAACACAGGTAGAAGAGGACGAAGAACCAGGGCATCTCGACAAAGTAAAACCGAGTCGGCAAGGAAAAATGTGGTGTTAGAGTTACCATCTAGTGTATTGGAAATAGAAGTAACAGCCACAGTGTCATCACCACCACATAACGCCAACACATCAGATAATGACCAGAACATAGAGGACACAAAGAGACAAACGAATTCGATAAAGAAGGAGACAAGAACTACAAGATCACGAAAGGGAGCTGACGAGGATACCTCAGAGCTGTTGTCTGGAGCAGTAGACTCCTCTCAAAAACGACGAGGTCGGCAACAGAAAGGAGTGGCTGTACCCTctgatgacccgcagccagaaagtgagactgtagcaacagcaatgtctacagatgaagagtctcagacgattgattctactgctagaagacgacgaggacgatcacggaaaggtgtggctgataagggtaaaactactaccagtgaaagcactgacgacccgcagccagaaagtgagactgtagcaacagcaatgtctacagatgaagagtctgagacaattgattctactgctggaagacgacgaggacgatcacggaaaggtgtggctgataagggtaaaactactaccagtgaaagcactgacgacccacatccagaaagtgagactgtagcaagagcaatgactacagattctgagacgattgattctattgctggaagacgacagggacgatcagggaaaggcgtgactgatcaggataaaactacaaccagtgaaagcactgacgacctgcagccagaaagtgagactgtagcaagagcaatgactacagattctgagacgattgattctactgctggaagacgacggggacgatcaaggaaaggcgtgactgataagggtaaaactactaccagtgaaagcactgacgacccgctgccagaaagtgagactgtagcaacagcaatgtctccagatgaagagactgagacgatggattctactgctggaagacgacgatcacgatcacggaaaggtgtggctgataaggataaaactgctaccagtgaaagcactgatgacccgcatccagaaagtgagactgtagcaacagcaatgtctacagatgaagagtctgagacaattgattctactgctggaagacgacgaggacgatcacggaaaggtgtggctgataagggtaaaactactaccagtgaaagcactgacgacccacatccagaaagtgagactgtagcaagagcaatgactacagattctgagacgattgattctactgctggaagacgacagggacgatcagggaaaggtgtgactgataaggataaaactacaaccagtgaaagcactgacgacccacagccagaaagtgagactgtagcaagagcaatgactacagattctgagacgattgattctactgctggaagacgacggggacgatcaaggaaaggcgtgactgataagggtaaaactactaccagtgaaagcactgatgacccgcagccagaaagtgagactgtagcaagagcaatgactacagattctgagacgattgattctactgctggaagacgacagggacgatcagggaaaggtgtggctgataaggataaaactacaaccagtgaaagcactgacgacccgcagccagaaagtgagactgtagcaagagcaatgactacagattctgagacgattgattctactgctggaagacgacagggacgatcaaggaaaggcgtgactgataagggtaaaactactaccagtgaaagcactgatgacccgcagccagaaagtgagactgtaacaacagcaatgtctacagatgaagagactgagacgattgattctactgctggaagacgacagggacgatcacggaaaggcatgactgataaggataaaactactaccagtgaaagcactgacgacccgcagccagaaagtgagactgtagcaagagcaatgactacagattctgagacgattgattctactgctggaagacgacagggacgatcagggaaaggtgtggctgataaggataaaactacaaccagtgaaagcactgacgacccgcagccagaaagtgagactgtagcaagagcaatgactacagattctgagacgattgattctactgctggaagacgacagggacgatcaaggaaaggcgtgactgataagggtaaaactactaccagtgaaagcactgatgacccgcagccagaaagtgagactgtagcaacagcaatgtctacagatgaagagactgagacgattgattctactgctggaagacgacagggacgatcacggaaaggcatgactgataaggataaaactactaccagtgaaagcactgacgacccgcagccagaaagtgagactgtagcaagagcaatgactacagattctgagacgattgattctactgctggaagacgacagggacgatcacggaaaggcatgactgataaggataaaactactaccagtgaaagcactgacgacccgcagccagaaagtgagactgtagcaagagcaatgactacagattctgagacgattgattctactgctggaagacgacgaggacgatcacggaaaggcatgactgataagaataaaactgctaccagtgaaagcactgacgacccgcagccagaaagtgagactgtagcaagagcaatgactacagattctgagacgattgattctactgctggaagacgacagggacgatcacggaaaggcgtgactgataaggataaaactgctaccagtgaaagcactgacgacccgcagccagaaagtgagactgtagcaacagcaatgtctacagatgaagagactgagacgattgattctactgctggaagacgacagggacgatcacggaaaggtgtggctgataaggataaaactactaccagtgaaagcactgacgacccgcagccagaaagtgagactgAGACTGCTTCCATTGATAGAACAGTGTTTACAGATGAAAAGCCTGCGACAACTGATTCTACCGCTGGAAGACGACGTTCACAAACTCAGAGAGGTAAAGCCGCGAGGGGACCAGGAAAAAAGCAGATCAAAAGTGAAGAGTCATCGCCAGCTGTTGGCAAAAGAAGACTGACAAGAAGTAGGAAAATATCCGATACCGACGATGGCGCGGGGGAGGAACCGTCGAGTATGGACGAGGACGAAGACAGTTCAGCATCCAGAGCAAAACGGTCGAGGAGATCATTGTCGAACAAAAGCGAAGACACACATATCACTGCAGCAAATCCATTAGAAACTGCTGATGTACAAGAAACGAACAAAACACCTACAGTAGCAATCAAACCGCGCGCTCTACGAAAAAGAAAATAG

Transcript

alvinactis_v1_g13881

Protein

alvinactis_v1_g13881

MATGSLASIADYEDDDTDADDETTVDWNIKGTHLRGRFTISQDGLCPRCETSSVVFVIVDELFPMGDMPEILCTLIAKGKAVLWSSQNKKGCKAPPTFLCRGFCPPDPLGAGFNVNWSNVSLQDLFFSSQPRNANTGPTVQQEGESKDENYDVEYGENGSDDDDDDDLDEDELIKQMLAKEAQKTPQEDITEETENQPSYESETPQPDDTIPPHLRTTHTVYSTQSTSSSVQSSTNTSTIESQDKSFQYPVSSDGGCPYCYSKNVKYIIVFADGMRDGDLPFTLRELIKRDQAFKMAKGTNDPPSFQCQVCHYGFNLDWSSTNLELIFGIAKGGSTETSNTTTTSTSSVPPPRVPPPTRYQPPFPPPGLPPRPGMPPPRMPPHGIPPPRIPPPRMSPRLPPPRVPPPGFSPPRAFPPGPRGIPPPGCPAVPPPPGHVPPRVPPPRIPPPRVPPPRVPLPRVPPPRVPLPRVPPPRVPPPRVPPPRVPPPMNIPPRAPPPYGGGLPPRYPRPPYQYGHHPHHPHHRPPPGPPMYGRYADYGYHDPYYPPPMPPIPPPPFGHYPHHPRGYPRPFPPPPVPEYHYNYPPPSVPAPPGTYPARPYPVSRFSSNTHVTQDTPITSDVTENNDVDEAKSLEDSHRLEELLNQIDKVRGEGQETDDNMSSEEPNSFSEEQVDDRTAGDGIQDTEPTEPTAEITVGEDEVTQRTVTDDTDDNVGEEEVTQRTVTDDTDGNVGEDEVTQRTVTHDTDDNVGEDEVTQRTVTDDTDDNVGEDKVTQRTVTDDTDDNVGEDKVTQRTVTDDTDDNDSSEDQFVTPCESASDLLTTDKPSTSKETEQSSDALTTIQTISPRTKQGRKRKAPSKTDEDEEDENTKQQKVTDDSSQEELTVELDVKRTITTKPNTGRRGRRTRASRQSKTESARKNVVLELPSSVLEIEVTATVSSPPHNANTSDNDQNIEDTKRQTNSIKKETRTTRSRKGADEDTSELLSGAVDSSQKRRGRQQKGVAVPSDDPQPESETVATAMSTDEESQTIDSTARRRRGRSRKGVADKGKTTTSESTDDPQPESETVATAMSTDEESETIDSTAGRRRGRSRKGVADKGKTTTSESTDDPHPESETVARAMTTDSETIDSIAGRRQGRSGKGVTDQDKTTTSESTDDLQPESETVARAMTTDSETIDSTAGRRRGRSRKGVTDKGKTTTSESTDDPLPESETVATAMSPDEETETMDSTAGRRRSRSRKGVADKDKTATSESTDDPHPESETVATAMSTDEESETIDSTAGRRRGRSRKGVADKGKTTTSESTDDPHPESETVARAMTTDSETIDSTAGRRQGRSGKGVTDKDKTTTSESTDDPQPESETVARAMTTDSETIDSTAGRRRGRSRKGVTDKGKTTTSESTDDPQPESETVARAMTTDSETIDSTAGRRQGRSGKGVADKDKTTTSESTDDPQPESETVARAMTTDSETIDSTAGRRQGRSRKGVTDKGKTTTSESTDDPQPESETVTTAMSTDEETETIDSTAGRRQGRSRKGMTDKDKTTTSESTDDPQPESETVARAMTTDSETIDSTAGRRQGRSGKGVADKDKTTTSESTDDPQPESETVARAMTTDSETIDSTAGRRQGRSRKGVTDKGKTTTSESTDDPQPESETVATAMSTDEETETIDSTAGRRQGRSRKGMTDKDKTTTSESTDDPQPESETVARAMTTDSETIDSTAGRRQGRSRKGMTDKDKTTTSESTDDPQPESETVARAMTTDSETIDSTAGRRRGRSRKGMTDKNKTATSESTDDPQPESETVARAMTTDSETIDSTAGRRQGRSRKGVTDKDKTATSESTDDPQPESETVATAMSTDEETETIDSTAGRRQGRSRKGVADKDKTTTSESTDDPQPESETETASIDRTVFTDEKPATTDSTAGRRRSQTQRGKAARGPGKKQIKSEESSPAVGKRRLTRSRKISDTDDGAGEEPSSMDEDEDSSASRAKRSRRSLSNKSEDTHITAANPLETADVQETNKTPTVAIKPRALRKRK*

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR017956	Conserved_site	AT hook, DNA-binding motif	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan