Gene detail

Detailed information of alvinactis_v1_g14325 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_7:5871115...5887667
NR annotation: XP_031561045.1, uncharacterized protein LOC116297048 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g14325

ATGAGAGCATTTTGCGTCGCACTTGTCATCTTTGGTGTATCTGTGAAGTGTGCAGTGTTCAACGACGTTGCAACAGTTAGGAGAGCGAGATGTTTTGCAAACTGCTTGACAGAGGTTGCCAAGATGTCTGCACCGGATATTGGTTGTCATGGAAACAAGTGCAAAGAGTGCAGTAGACCTTGTAATGTAAAGTTCACCACCGTCCAGAATTGCAAGTCGAGTTGTAAAAATTCACAAATCTGCAAAAAGAGTTGTCAGTTTCTCCTGACCTTGAAGAACAATCCCAAGGTTCTGAAAGGAAAGAACACCATTACCAACAATCCAGGAATTCCTGTAGAAGTAATCAAAAATATTACAAGTCTTACGTTGTCATGGAAACCTGCGAAAGCCAGTGAGGGCAGCGTGGTTTATCTTTTGAAGGAGAGAATCACTGGGGACTTTAGAGGTCGACTGTCAGAGTTCCCCAATCTGATATTCTTCCAACCAAAAGCTGTAATCAGCATAAAACAGGTTTGTCGTTTCGCACCGAGGTTCAGGTACAGATGGAACGGCTTAAAATTCTTCTTCACGGTTGTAGCGCTGACTGAGAAGAGCAGCATGGCAGCAAGCAAAGAGTCATCGGCAATCGAGATGACCAGACCTAATCCAGTAGTCAAGGTGGCCATGCCTCATTTCGTGTACGACCCGACGTCAATCGGTGATAAAGTGCGACTAACAACGACTGTCACACCTTCACCAGCTCAAACAGACTTAATCACTCAATACGCAATGATGTGGAGAATGGCGTTCTGTCGACCAATTGTTGTTCAAAGATCGTCAACCTCTCGTGGGGCATCGAGGAATATATCCATGTTCATTTGGCAGAGACTTAAAGCCTGCAACCACACGTTAAGGGTGTATTCCCTGATCGAGTGCATCCCAAGTCTTCCCACAAGTTTAACGTACGTGTACAAAGGGTGTCGATTTGTAGACAATTTCAACAAAACGCTTTGTCATTCCTTTGATCCTCCGCCCACACCAGACAGCGCCAGAGCAGTTCGCAATCTGAAACACTCCCCTCTGAAGATCACTGAAGACTTCCGGGTCAATACTACATTCCTGTGGCTACCCCCCACATTTCCATTTGGTCCAGTTCGTACTTTCTCCTTTGCGTATGGTGATATTACAAAGACATTTTTGGGAATCTGGATTGCTACAAGAGggtctacaAAACAAACGTCGTTAAGTGTGGTAAACCTTCTTCCAAATATCACAGTGCGAGTTCAGATTTTGCCTATTTTCTCTAACGCTGCAGGAGTGAAACGAACTATTTTGTTCCGCACTCCAGCTGTTCCTCAGAATAAAATTACTGCTCGAAATGTCCACGCCGACAGATTCACCTTTTCTCCGTCAACCCTTTTCTCTGTGCGTGTAGCTTGGCAATCACCAATCTTTACAAATGGGATTACTGGTTATGAAATCATGTTGATGAAGGGAAAGAAGCCACAGAAATCTGTGAAGACGACTGAAACGTTTAATGTGTTTACTGGTATATTGCACAGTGAGCCATTGATGCTTGAAGTCATACCTCAGTACGCGCATGCGTGGATCAAACCCAAGGGAGTGGTCCTGAAGCTCAAAGCCCCAGCTCCTGCCATTCAAGATCTCGTCGTCCGTAATCTCGCACTTCACGACTACACGGTAAACAACGACGACCACACTTACGCAGTTAACTTTACTTGGGAACCGCCCCTCTTTCAAAAGCATCAAGCAGTGGATTACTATCAGGTTCACTATCATCTGATCGGACATTCAGGGGATCATGTcaattgcccatcgcacaggggtggtgtgaacagaccttgcgcacccgagacaacgAAAACTACCAACTACTTGATCCCTAGAGTTTCTCCGTGGCAGTACATCATTTTATCGGTTAAACCAGTTTTTAAGAACTCACCGTTCGTTCAGGGAATCTCAGAAACGTTGACCACAAATCCATTGGAGTTCTCTTGCAAAGGAAAGCGACCAGGGTATTACAAGGACAGTTTAGACTGTAGTGTATTCTACCACTGTGGCTATCATGGACAGAAAGACCATGGGAACTGCCAGGAAGGATTGTATTGGAATGACGAACTGATGGCTTGTGATTTGCCGATAAATGTCAAGTGTAATGGAAAGAAAAAATCGTTTTGCGATGGGAAGGGCGAGGGATACTACAAAGACCCGAAGCACTGCGGGTCATTCTACGAGTGTGATAAACATGGCTACGCCTATCACTTATCCTGTGCAGATGGATTGTACTGGAGTGAAACGAAATCCACATGTGACTCGGAACACGACGTTAACTGCAAGCGTGATGAGTCATGGGaccataactctggataa

Transcript

alvinactis_v1_g14325

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01607	CBM_14	Chitin binding Peritrophin-A domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051940	Family	Chitin-binding developmental regulator	Interproscan
IPR002557	Domain	Chitin binding domain	Interproscan
IPR036508	Homologous_superfamily	Chitin binding domain superfamily	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23301	CHITIN BINDING PERITROPHIN-A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0008061	Molecular Function	chitin binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan