Detailed information of alvinactis_v1_g14486 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_7:7999328...8030542
NR annotation: XP_020896964.1, general transcription and DNA repair factor IIH helicase subunit XPD [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q60452General transcription and DNA repair factor IIH helicase subunit XPD OS=Cricetulus griseus OX=10029 GN=ERCC2 PE=1 SV=1
O08811General transcription and DNA repair factor IIH helicase subunit XPD OS=Mus musculus OX=10090 GN=Ercc2 PE=1 SV=2
P18074General transcription and DNA repair factor IIH helicase subunit XPD OS=Homo sapiens OX=9606 GN=ERCC2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13307Helicase_C_2Helicase C-terminal domainDomainInterproscan
PF06733DEAD_2DEAD_2FamilyInterproscan
PF06777HBBHelical and beta-bridge domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006555DomainATP-dependent helicase, C-terminalInterproscan
IPR014013DomainHelicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typeInterproscan
IPR010614DomainRAD3-like helicase, DEADInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR006554DomainHelicase-like, DEXD box c2 typeInterproscan
IPR045028FamilyHelicase superfamily 1/2, DinG/Rad3-likeInterproscan
IPR010643DomainHelical and beta-bridge domainInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan
IPR001945FamilyRAD3/XPD familyInterproscan
IPR013020FamilyATP-dependent helicase Rad3/Chl1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0016818Molecular Functionhydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydridesInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006366Biological Processtranscription by RNA polymerase IIInterproscan
GO:0045951Biological Processpositive regulation of mitotic recombinationInterproscan
GO:0006289Biological Processnucleotide-excision repairInterproscan

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