Gene detail

Detailed information of alvinactis_v1_g14557 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_7:9155488...9165694
NR annotation: XP_020896836.2, putative neurotrophin receptor LTRK 1 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g14557

atgacgcaaattgtgtcgtccacataccgtccatacaggctgggagggttggtaaaagtcgccagtgcgtatggacggtatgtggacgacacaatttgcgtcattcaaaaagatcagatcaatgctttccaccaacacctggatagccaagaccccaacatcaagttcaccgtagaacgctactctgatgatggcctccctttcttagacacgcttaataaggttcttgatgatggcaccattgacgtctccatctttaggaaaaagacacatacagatcggtatcttcacttttcaagtcatcaccctcctcagcacaaggcggctgtcgtgcgcactttagtccacagaaccaacaactttctttcgaaagattgccacaaagacaaagaacgcactcacattggtagagctctcgctgctaatggatacccacggcagtttatccataaattttcacaagaccgaaagatagctgagaagaaatctgacacggaagaacgaaaaggtttcgcacttttaccgtacgtgcaaggtacaacagaaaggatcaaacgtgtcctagaaagccacaggattgaagtctgcgtaaaaccactaacaacgctgagacatatcttgtccaagcctaaagacccgctaccgaaaagaaaagaagaccggagttgtgtgagtaaagggatcaacatcatgatcaatgaatcagattcaacagcgggaactatagcatttagtttaaagtcactttcaccttcgtcgtctctttgggttacttgtcgctggctgataaccgctgcacaagattacgtcgttcacatcacaatgcgaccattaaaattgccagcgggtatcaaagaatgtgatagccttcggttctggaaatgtcctctcagctcttcgggtcgttatatgtggatacagtacagtactgatcacattggaacgttaaatacctttcgcacatcctacaaggctgtatcacaagATGTACTCAATGGAGGCCTGGCCGCAGTCAAGTCACTTCGAAACGAAGGTGAATTCAATGCTTCTATAAGTACACGACAACTGAAGAATGACGATACTCTCATCGCCTGTATGTGGAACCTCACCGTACCACGAGGACGCTTTGTAAGATTGTTTATATCAACGGTCCCTGAGCTCGGATATCATGATTGTTATCGACAAGAACATTTGGATGTACTCGATGGTCTGAGCATACGAAGTCCTCTTCTAACATCACTGAATTATACACTCCCGAGGGAAACCGTTTTAACATCGAGTGGAAGACACATGTTGATACGTCTTGTTCCCAATCAGAAAGGAATGAGTTGTGTCTTTAAAATGCGTTTTGACAGTAAAAGCAACAGTGTTTCAGTTAGTTCAGTTTTACCTACATCGATCCATTCATCGTTGGTTGTAACTGTTACTCCTGCTATAAAGATCTTGAACAAGACCAACACCACTCTGACAATAGCTGACACCAGAGAACAGTCGAAATCAAACCAAGTCCCCACCAGCACCATAGTTGGAGTAGGACTGGGTTCTGGGGTACTTGTACTAATAGTGTTGTCTTTAATCTACGCGTTTGTCAAGAAGAGACACAGGAGTAGTTACGACAGAATTCAAGTTCCGTGCGATTACTGGGAGATCGTGTCCATCCAAGTGGAACTAATCGAGGAGCTCGGTAAAGGAGCGTTTGGTAAAGTGTGGAAAGCAAGTATGGATAGAAAGGTTGTTGATGAAAAGACAAAGCCAGTGATGGAAGCCAGGCAGAACACAATGAAGGACAGCCAAGTAATATTAACTAAGAATGAAAATGATCTCATGACCGTGGCTGTGAAAATGTTACATAGCGATGCTACACTGGAAGAAAAAAGTGAATTTCTTCGTGAAATCGAGTTCATGAAGAATGTTGGTTGCCATATAAATATCATTAGCATGGTTGCTTGTTGCACAAAAGAGGAACCAGTGTTTTTGGTTGTGGAGTTTGCGAAACACGGTGATTTATTAGACTTTCTCAGAGAGAAAAGAAAGAAGATAAGTTGCGAGTCTCATCGTTGCCCAGAATATGAAGGTCAAGAACTATCCGTCGAAGATGAAGACGTCAAGCAACAAAATGAAAACTTGTTGAACGATTTGATTTCCGTTTCCTGGCAAATTGCAACAGGAATGgaatacttggcgtccaaaggaatcgttcatcgcgatctcgctgctcgtaacattttggtagctgaagacaacttggtcaaagtcgccgatttcggtctctcgcgtcacgtgacatacaaagatcaaatctaccaggccgagggacgccggaagttgcctataaaatggatgtcaccggaagccatttttgaccagacgtttacaaccaagagtgatgtatggtcgtatggagtggctctttgggagatattctcgatgggaggagcaccgtaccctaccatcaccaacagccagttgttgcagttgttaagaaaaggtcacagaatggacaaacctgacctctgcccagatgacatATACCAAATAATGACCAGCTGTTGGCAAAGTCATGCGCAAGATCGACCGTCGTTCACTGACGTCATACAGAGCCTTGAGAGACTGATGACACGTGACAAACCGTACGTTGAGTTCACGGGAATTAACGAAGACGACGAGTGCTATTTAGTGCCATCGTTTAACAGCGTCCCAGAAAGCGAAGGGTCTGGAGACGAGACAACCACGCTATAA

Transcript

alvinactis_v1_g14557

Protein

Uniprot

Uniprot term	Description
Q91147	Fibroblast growth factor receptor 2 OS=Notophthalmus viridescens OX=8316 GN=FGFR2 PE=2 SV=1
P22607	Fibroblast growth factor receptor 3 OS=Homo sapiens OX=9606 GN=FGFR3 PE=1 SV=1
P18461	Fibroblast growth factor receptor 2 OS=Gallus gallus OX=9031 GN=FGFR2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035914	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan