Gene detail

Detailed information of alvinactis_v1_g14598 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_7:10261004...10263772
NR annotation: XP_031563982.1, uncharacterized protein LOC116299463 isoform X2 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g14598

ATGTCTTCCCCGAGCTCTAGCAGGACTCTTGCACCATCTAAGGAAAAAGAAAATGGCACCAAACTGAGAAGATTGCTCCTGGATGGTGGCACACAAGTTTTGAGAAATCTGTTTGACCAAATTCGTCGACCACCAAGTACACTGGCTGAAGTACTTAAAGCACACGAAGTTCAGCTTCGCCGGAAATGTAATGGCGATCAAGTTGGCCTATTATTTCCTTCCCTAGGAAATCCATGCTCCTCAACGTTTGATATCTCACTTCTCTCGCTGTTGCTCCGTGAAATTAGTGGCCTTGTCGCCCCACATACAGGCTGGAGTGACAAACCCGACGAATTCGACACGTGCCTTGCTGCAAACATTGTTCGAATACGAATCTTGAGAAACAAATTTCAACATTTGCCAAATAGTGGAATACCGGAATCCGAGTTTGAACAACTTTGGGAAGAAATATCTGCTCCTCTAACTGCACTTGGGCTGCAACAAGATGACATCGACCAACTGAGGTTGAATCGAATTCAAGATGAAGGCGAGGTCCAATATCGATTTCAACAATGGTTTGAATTTGACAAAAGGGTCCACGATCTCACAGAAAGCCTTGGAAACCTACAAACCGACGTCCAGTGCATTAAAGAGTCGATCGAAGAACCTGCGACATTAGGACCACTTCAAAGCTGCATTCCCGATGAGCCTTCCAATTTCATTGGACGTGTAAAGATCCTTGATCTAATCGTAAGAGAAGAAAGGCCATTGGTAGTTGTCCATGGTATGGCAGGCATGGGTAAGTCGACTGTCATTAAAAAGGCTTCGTGGGATCTTCATCACAAACACAGAAAGACTGTATTTTATGTTGATTTGTGGAGATGCAAAGCCTCAGAAGAAGAAATCTCCAAAGCCATTGTTTCTGTTCTCCGTCGAGGTAGAATCACAACGAATCCCATACAAGCACTTGATAACTGGGTACGGACCTTAAAACAAGATGTTATACTTGTTTTAGATAATGCTGAAGATGTTTTGACTCCGCGTGACAATCTGGAAAAACCCGGTGATTTTGAGAACATTCTGCTTAAAATGCGCCAATTTTCAAACCAACAAGTAAGGTATTTAGTAGCCTCAAGAGAGATCTTCAACCTTGATTTAGAAAAGAAAGAAATAAAGTTGGGTCCCATGTCAGAAAATGAGAGTTTGGAAGTGATAAACAATTACTCACTTGAAAGAGATTTTCATTTTGACGCAAGTGAAGCCAAAAAGCAAACTTTAGCAGAACTCTGTTTTCATATCCCCTTGGCTTTAAAGATTGTTACACCCTTGCTAGAAGACTACGAAGCAGATGAGTTGATTGAAAGCCTTCAATCGAGTCGATTGGACGTACTAGATGGGGTAAAACGAGCAGTTTCTTTGTCCTTTAGCAAACTGAATGACAAACTCCGCACCGGCTTTGTACAGGTTACAGTTTTTGCTGGCCATTTTACTGCAAGCTCAGCCACGGCCATAATGGAATTAAGCAAAAGAGAGGCTGTGGAGTATCTGAATATTCTGTGCAGAATGAGTCTTCTTCAAAAAGAAAACAGAAGATACTTTCTTCATCCTTTTATTCATGAATATGCAACTGATTATGGAAAAAGATGCGCAAAGAAGCACCTTCAAAAAGGAAAAAGCAATTTTCTAAATCATTACAATTCCGTCCTCTTGGAAAATACAAGTTTATATTGGACGAAAGACAAGTGCAAAGCATCTTTAAACAACTTTTTCGAGGATCGAGTGAACTTTGTGGCGGCTTTGGAGAGGACTTGCTCTTTGGCGCTAAACAAACAAGTAAGCAACAAATGGGCAAACAAGGAAACTTTGACCAAAGTAACCAGCATGACGAGATATCTGGAAGCATGTATTTCCTGGGATCTACTAGAAAGATTGATTGATGTACTCCTGAAGCTAGTGCAGAAAAACAACATGATTAGTCAAGAACTGGAACTCGTGTGTTGGAAAGGCCACATTTCCAGACGACAAAGCGACAATGAAAAGTATGGAATTCTGGTCAAACAAGCGAAACAATTATTCGAAGAGAATAAAATGAATTTTCCAAGCACCACACAGATTTGTTATCGAATTTTTCAAGCGAAGCATTTAGAAAGTCTGGGAAAAGAGGAAGAAGCTGTAAAAGTTCTCGGTGATGCAAACAAGATCTGTCAAGCAAACATGGAATCGTCTCCCATGATAGTAGCTGATTATGCAAGAGCAAGTGGTATGCTTGTTCATAACTCGAAAAAAATAGATGGAACTCATTCAGCATTGGAAACGTTTCTTCAGCAACAAACTCTTGACGTTTGTCAAAAACATTTAGGAGAACACATTCACACTGCCTTTTGTTTTAAAGATCTTTCAGACCGTTACATAGATGTTAATAGCTTTGAAGATGCACTCACATACAACGATAAAGCACTCGAAATGTTCAATAACTTGAATAGCGCTTTGGAAGCACCAGTAGTTCTACTCCTAAAAAACAGAGGGATATGTTATAGAAATCTTGGAAGAATGAAAGAAAGTGAAGAATGCCTGATCAAAGCAAACCAAATGGCATATAAAACTTTAGGAGGAGATAACACGTACAAATTTTGGATCAACGCTGAGCTGGCAGTTCTCTACCACGAAATGAAGGACAGTCAAAGAGCGCAAGCCCTAGCGAAGCATGCTGTGGACATGGCTATCAATTTAAAGTTATCTCGAAGTAATTGGCGTGATTACGAATATAAATTGGACCCAATTCTGAAGTAA

Transcript

alvinactis_v1_g14598

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18738	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF00931	NB-ARC	NB-ARC domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041249	Domain	DZIP3-like HEPN domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR002182	Domain	NB-ARC	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691	REGULATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0043531	Molecular Function	ADP binding	Interproscan