Detailed information of alvinactis_v1_g14768 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_7:13274307...13353952
NR annotation: XP_031560255.1, nuclear exosome regulator NRDE2-like [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9H7Z3Nuclear exosome regulator NRDE2 OS=Homo sapiens OX=9606 GN=NRDE2 PE=1 SV=3
Q80XC6Nuclear exosome regulator NRDE2 OS=Mus musculus OX=10090 GN=Nrde2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF08424NRDE-2NRDE-2, necessary for RNA interferenceFamilyInterproscan
PF08477RocRas of Complex, Roc, domain of DAPkinaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR011049Homologous_superfamilySerralysin-like metalloprotease, C-terminalInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR020859DomainRoc domainInterproscan
IPR013633FamilysiRNA-mediated silencing protein NRDE-2Interproscan
IPR000488DomainDeath domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13471TETRATRICOPEPTIDE-LIKE HELICALInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0031048Biological Processregulatory ncRNA-mediated heterochromatin formationInterproscan
GO:0071013Cellular Componentcatalytic step 2 spliceosomeInterproscan
GO:1902369Biological Processnegative regulation of RNA catabolic processInterproscan

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