Gene detail

Detailed information of alvinactis_v1_g1564 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_1:26469843...26473708
NR annotation: XP_031566763.1, metabotropic glutamate receptor 3-like isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g1564

ATGGCAGTCGCTTCTTTAAATAATACCAAAGAAACAAAGGCGTTCTGTTGGTTTCCGACTATTCTGGTGATTAGTCTGTTCCTAGTACGTTTCACCAACACCGAAAGACTTGATTTATATACACAAGGTGATCTGGCAGTCGGAGGAATGTTCCCGATTCATTCAAACTGTGATTCCAAGACGCCATCAAAACAATGCCATCCAGGTTTATATCCAAAAGGTTTGTTTCTCGCCGAGGCTATGGCATATGCCGTTCAACTGGTGAATAAACAAGGTATCATACCATTTAATATCTCACTTGGCTACCACGTGCGTGATACGTGTAACAGTCTAAGCATTGCTGTTGAAAATGCACTTCTATTTTCAAACCAGCGGAAACGATCATCTCGCGAAGGAATCAATGGTTACGGTAGACTTGACGTGGATCAATACAAGGCAAGCAGCCCAGCGTCCTTGATTGGTGTCATCGGGGCAGGAACTAGTGAGCTGAGTTTAGCTGTTAATAACATACTAAGCCTATATGGCATTGCACAAGTAGCGTACGCCTCTAGTGCAGCCTTTCTGAGCGATAAGAGCCGATATAAAACGTTCCTTCGTGTCCTGCCACCAGACAGTCTCCAAGCTAATGCAATAGCGCAACTCATGGCTCATTTTAAGTGGAACTATATATCGTTGGTGTCGTCCGATGATCACTATGCAGGTCCCTTACGCGAGGCTTTCCGGGCAGCGGCTCAGCGATTCGAGATCTGTTTATCAAATGACATCGTTTTCTCGTACCGTTTGCCTTCCACTGAAGTTATTCAACGCGGATTGCAGAGTATAAAACAAACAGACAAATCGCGCGTGATTTTGCTTTTGGCTTCAGAGATCACTACTCGGGCGATCATGAGGGTTGCCGACTCGCTCAACCTGACCGATCGTATATGGATTGCAAGCGATGCGTGGTCCAACGCCGAAAAGCTTCTCCAGCGACGGTTGTCCGTTCTTAGAGGTGGTCTTGGTGTCCTGTTTAGCTATAGACCCGTCAAGGGCTTTGTGGAACACTTACAGCATCAACTGAATACGACTGAAGGATCTTTAAACAACGATCCATGGCTTCGAGGCCTGTCATGCGCAGTTCATGCAGAGGGCCTTGATATAGGTTTAAACTCAAAAACTGAACGTCAAGAAACAGGTTTTGATAGCGTGTTCGCGCGTGTTGATTACGTCATGAACAGTGTGTTCATTTTAGGTCACGTGATCAAAGAGTTCTGCCTTGAGATTGATTTCAATCCAAACGCCACAATGGAAGCAAGAAAAGCAAAGTGCCTTGAGAACATCTATCCGAAAGCTTTGTTGAGATTTATTTTCAACAGAACTGTCCGTGGTTTCAGTCGAAACTTCACGATTGATAAAAACGGAGACCCCTCTGGAAGTTACGATTTTCTCAACATGCAAGAAAACGCGGGAAAATTAAACTACATCAAAATTGGTAGCTACGACTCAGAAACACAGACACTACAAGTGAATGACTCTGTTGTTGATATGGGGGAGGGGAACGGGCGCGTACTGCAGTCACGTTGCAGTGACTATTGCCCTCGTGGGCATTACGTCGTCAGAGATCGTGCAGTGCAGTGTTGTTGGGAGTGCAAGGTATGTTCTCCTAGTCACGTGAGCAACGTGTCCATGGCAGCAAGCTGTGTACAGTGCAATGAAGATCACGTGTCTAACAGTAACAGGAGCCGGTGTGTATATGTTGCCTTAAAGTACCTGACGTGGACGCGCCCTTGGAGCATAGTCATTTGCGTGTGCACCTTGGTGGGGTTCGTTGTGTCTGTGTTCATTATGTTGGTGTTTGTTCGACACCGACATAGCCCTGTAGTCCGTGCGAGCTGCTTCGAGATAAGTGTCGTTCTTCTATTCAGTATTTCATTGGGGTTCCTTCTTCCTCTGATGAAACTAGTTAAGCCTAGTGAAACTATCTGCAAAGTCTCTGCCTTGTCGTTTGCCGTCATTTTCACCATGATTCTATCACTCACCTTGGCCAAGATCAATAGAACGGTTCTGATATTGAAGAATCGTCTGAGCAGCGGGTTCTTTCACAGACGATTCCTACTATCAAGTCCAGCTCATTTCACTAGCGTTGCTTTACTTACAGCGATACAAGCATCGATCTGCATTGCGTGGTTCTTCAGTGATCCTCCCAACGCTGCCACCATCATCAAACCCCCACCCTACCCCGCTCGGTACTTACACTGCACAAACCACGAACATTTCTGGTTCTTGATTTCCAGTGGGTTTTTAATTGTTCTCAGTTTTCTCTGCACTCTACTCGCCTTTCGGTCCAGGAACTTCCCCGAGAATTACAACCACGCGAAGTTTGTGTCACTAGCGATGTTCACGTTCAACATGGTATGGCTGACGTTCATGTGTGCATATTATGGGAACTCAGAACCTGGATTTCAGCAACCTATATTCCATTCTTGGGCAATTATATTCTCGAACTTTCTACTGCTGTTGTTCATTTATGGCCCAAAAGTGTACGTCATTTTCTTCCGACCCGAGCTGAACAACGCCAGAACATTTCGTGAAATGACCCTCCAACATATTCTAGGTGCATCAGAACCATCCAGGAACTTCTCCTTAGCTTCCCTAACGGCCCCTGGACATGGCAACGTGTACATGATGGACTGTGATAGCAACAACAAGGCTGTCCAAACACTTCGTGTTTTCACCCACGACGCGCAGACGCAGACGGAGTTCAAGGAGAGCAAACACGTGCACAAAACTAGTCTAGTTCGAAGGCTTTTGAGGATCGGGAGCAGCCGACGCAACAACTGGAAGACTGGTACTGCAGTCTGTAAGCGCGGGTACAGCGAAAGCGATGCCCATAAAACGTCGTTCGGCGATACAGAAATGTCCGGTCCGTGCCATAGTTCCCCTTATCCTTTATATTCCTACTGTGAACTGGACAATCCCCACGCAGAAGATCCTCTCGATCCCTTCGACAACGAATTCCCTGATGATTTCGGCTTGCGCAGGATCGAGGAAGACATGGGCGTTACCAATGGCACAGCGAACTCTGAAATTGAAACCGACGGAGGCGAAAGCAGCTTGATTAATGAGTACTACGTTAGTATTAGTCCCGATATAGCAAGTTATAGCGAAGgtaaggttgagttatggggagaatccgcgactgatgaggcaataggcatacaacgaggatag

Transcript

alvinactis_v1_g1564

Protein

Uniprot

Uniprot term	Description
P31422	Metabotropic glutamate receptor 3 OS=Rattus norvegicus OX=10116 GN=Grm3 PE=1 SV=1
P48442	Extracellular calcium-sensing receptor OS=Rattus norvegicus OX=10116 GN=Casr PE=1 SV=1
Q9QY96	Extracellular calcium-sensing receptor OS=Mus musculus OX=10090 GN=Casr PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01094	ANF_receptor	Receptor family ligand binding region	Family	Interproscan
PF00003	7tm_3	7 transmembrane sweet-taste receptor of 3 GCPR	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001828	Domain	Receptor, ligand binding region	Interproscan
IPR017978	Domain	GPCR family 3, C-terminal	Interproscan
IPR000337	Family	GPCR, family 3	Interproscan
IPR028082	Homologous_superfamily	Periplasmic binding protein-like I	Interproscan
IPR050726	Family	Metabotropic Glutamate Receptor	Interproscan
IPR038550	Homologous_superfamily	GPCR, family 3, nine cysteines domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24060	METABOTROPIC GLUTAMATE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0001640	Molecular Function	adenylate cyclase inhibiting G protein-coupled glutamate receptor activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007216	Biological Process	G protein-coupled glutamate receptor signaling pathway	Interproscan
GO:0051966	Biological Process	regulation of synaptic transmission, glutamatergic	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04612	CASR; calcium-sensing receptor	-	G protein-coupled receptors	ko04030	deepkoala