Genomic Location: chr_8:15110897...15154665
NR annotation: XP_020903852.1, adenosine deaminase [Exaiptasia diaphana]
Species Alvinactis idsseensis sp. Nov. · all data for this species · gene families
| CDS |
| alvinactis_v1_g16883 |
| Transcript |
| alvinactis_v1_g16883 |
| Protein |
| alvinactis_v1_g16883 |
| UniProt accession | Description |
|---|---|
| Q5ZKP6 | Adenosine deaminase OS=Gallus gallus OX=9031 GN=ADA PE=2 SV=1 |
| Q6DG22 | Adenosine deaminase OS=Danio rerio OX=7955 GN=ada PE=2 SV=2 |
| Q63ZU0 | Adenosine deaminase OS=Xenopus tropicalis OX=8364 GN=ada PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0006605 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00962 all species → | A_deaminase | Adenosine deaminase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006330 all species → | Family | Adenosine/adenine deaminase | Interproscan |
| IPR006650 all species → | Active_site | Adenosine/AMP deaminase active site | Interproscan |
| IPR001365 all species → | Domain | Adenosine deaminase domain | Interproscan |
| IPR032466 all species → | Homologous_superfamily | Metal-dependent hydrolase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11409 all species → | ADENOSINE DEAMINASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0019239 all species → | Molecular Function | deaminase activity | Interproscan |
| GO:0004000 all species → | Molecular Function | adenosine deaminase activity | Interproscan |
| GO:0005829 all species → | Cellular Component | cytosol | Interproscan |
| GO:0006154 all species → | Biological Process | adenosine catabolic process | Interproscan |
| GO:0009897 all species → | Cellular Component | external side of plasma membrane | Interproscan |
| GO:0043103 all species → | Biological Process | hypoxanthine salvage | Interproscan |
| GO:0046103 all species → | Biological Process | inosine biosynthetic process | Interproscan |
| GO:0060169 all species → | Biological Process | negative regulation of adenosine receptor signaling pathway | Interproscan |
| GO:0009168 all species → | Biological Process | purine ribonucleoside monophosphate biosynthetic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K01488 | add, ADA; adenosine deaminase | EC:3.5.4.4 | Primary immunodeficiency | ko05340 | deepkoala |
Genes whose expression across the transcriptome samples of Alvinactis idsseensis sp. Nov. tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Alvinactis idsseensis sp. Nov., and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
