Detailed information of alvinactis_v1_g18294 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_9:10338907...10374452
NR annotation: XP_031563123.1, RNA polymerase-associated protein CTR9 homolog [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6PD62RNA polymerase-associated protein CTR9 homolog OS=Homo sapiens OX=9606 GN=CTR9 PE=1 SV=1
Q6DEU9RNA polymerase-associated protein CTR9 homolog OS=Xenopus tropicalis OX=8364 GN=ctr9 PE=2 SV=1
Q62018RNA polymerase-associated protein CTR9 homolog OS=Mus musculus OX=10090 GN=Ctr9 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan
PF13432TPR_16Tetratricopeptide repeatRepeatInterproscan
PF14559TPR_19Tetratricopeptide repeatRepeatInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF13374TPR_10Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR031101FamilyRNA polymerase-associated protein Ctr9Interproscan
IPR003107RepeatHAT (Half-A-TPR) repeatInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14027RNA POLYMERASE-ASSOCIATED PROTEIN CTR9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000993Molecular FunctionRNA polymerase II complex bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0016593Cellular ComponentCdc73/Paf1 complexInterproscan
GO:0006396Biological ProcessRNA processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K15176CTR9; RNA polymerase-associated protein CTR9-Transcription machineryko03021deepkoala

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