Gene detail

Detailed information of alvinactis_v1_g18676 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_9:18816044...18818956
NR annotation: XP_020912488.1, uncharacterized protein LOC110250220 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g18676

atgttttgCAAATTACCACTGCTTCTTTATAATCAAAGCATTCCAACATTTAGACGACCACTTCAACAAATGCTGCGTTTGGCCATTGACTACGTTGAAGAAGATAACAACGAAAGAAAAATGGCCATCCAGAGCATCGTTACAAAGATAGAAGAAAACGAAATAACAATTTCCAACTTGTCAAATTTTCTGGAACTGCTGCTCGTTAAGTTCGGAGTCGATCCAAACACTGCGGACGAAGaaggaaacactgcacttcactacttatcattacttagtcttgttggaattccaggcgagataactttcgacatctgccacaaactagagagttttggtttggcgttcaatagaaagaactgcaaccaagaaactcctcttttctttttgctctcaaatgctttaaaattggcaaaagaaaggggtggctcttcaggaatccacctggtagaaatatgcaggtttttacagaaagatcgctttctagtaaacgaaacaacacaaagtggacagtcagtctttcatttggttctgcagcttttccaagagggccttaacatacaagatgaggaaaagcaaaatatcttcatccatgaggcagcagaactgttgaagttatttgcacctcctataatcattaaaggcgtcactgttaacaaagttgatgatcttttgctctcacctcttcatttttgggcttctctttccctgtcgtcatctcgaaggtacacttccaaggtgtcccaagaatacacttttgaagaaattttggaagttacattcaagcatctgttgagctgtggtgctatgctgaatgccagaaatcgaaatgaagaaacaccactacatttgtgcaaaacctggagcgccgtgaagctcttggtagatgcaggagcaaacacaagcgatgttgatttatcaaaaagaccgcctcttgtcgttgctgcacagaatcgtctgtttatgaacaacactgattgtttttatccggatgtcacagaagatccaacaacgttctggaaaactgtgttcgacatgggctttgatctgtgggcgtgcgacaaagatggcgattctgtattaagcaatcttattgaatcagaggcctttgcacttgctaaagccttagttgaagttgcatgtgatgccagatacaacaaatcagttgaggctttagttggtgttttgaatgctatatgcaaagataaatccactcgaaccacctggaagaacattctggttgaagctgttctaaagtcaagactaagaccgttcgatgtcaacgcctcccttcgattctgctgtatcaacatcaaagCTCAAGAATGTTCTAGATTAGCAGAGGATAAGACAGCACAGGACAAAGCAAAGAGTGGATTAGAATCTGAAATGAAAATCAACCCAGTCACATCCCTttctgtccattggcaaattgccaaacagcttctctgttatggtgcaaatggtgaattttgcttggatgtagcagatagttgtcctgaactccaagatcttctaacaaagccactaatcatcgatgaactgccaatggtcataccctggacttcttattctaagaggtacgagaacatgctagctggagttgctaggcgacagaattgcaagttggtggaatcatattggcttcatgatcaaccgatagcaaacggttcatttggccatgtttttgcaggaatcaatgagaaggacggcatggaagtggccatcaagagaatcgaaaaattacgcatggttcgtcaagaagacaaacgagagatccgtagcttcactgctctccccgactgcaaacagattgttcgttacttggctttctctgaaagtgatgacttctcctatgtaatactggaacttatggagggaaatcttgatgaatactttggaagtacattctacgactcagacaacaacactgtcatctgtaaagatgttgtgatgggactaaagtatttacatgaccaaaatatcattcatcgcgacctgaaaccaagcaacattctgtacaaaatccatcccaatctgtgcctgaaaatcgctgactttggtctaagccgtcgtttagacatcaatctctcctttactgtgatgagtaccggtatcggtacccgagggtggattgctccagaagtggtcaagtcaagtacgaatgaacactccaagacgtctgatatattttcttgtggacttctcctacattatattttgtctccacaaaagcatccattcaacccagctcattgcactggaaaaagtatttggcaaatcaacactgaaacagaaagtaatcttttgagtaatagcatggaaggctgggatagttctctcgctcttgaagactctgatattgttcaaacaatgcttgatagcgatgaaaaccaacgaccatctgcatcagatgcattggatcaccccatgttctggtcaaagaagaaaaagatggatcttcttattgctgttggaaatcagccagaatttgaatgtccacgtgctgtaaagaccgcaacctctttgactgcagtggagatagatttagagaagagttttcctgggattgttaaatatgcaacatgggatgatcctaggtatgtgcaaatgcctgccattttcaccgaaatgacgcagcctattgtgaaaacgaccagaaaaggaaagacatacacaacaccacccagaaagtacgacactggctctgtagtggagttagttcggttcatacggaatgccgtcgctcatgtttctgatgccagtcgatcaagcgcaatcagaaaacaaattctggaagatgctgtttttttggatgattttcccaacctcttcatggaagtcttcaaggctgtgaccaaaaatggatgggatacaagagaagaaatcaagCATGCCATGGCAAATGAGTGA

Transcript

alvinactis_v1_g18676

Protein

Uniprot

Uniprot term	Description
Q557G1	Probable serine/threonine-protein kinase irlB OS=Dictyostelium discoideum OX=44689 GN=irlB-1 PE=3 SV=1
A9RVK2	Mitogen-activated protein kinase kinase kinase 1b OS=Physcomitrium patens OX=3218 GN=MEKK1b PE=2 SV=2
Q6Z2M9	Calcium-dependent protein kinase 4 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK4 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06479	Ribonuc_2-5A	Ribonuclease 2-5A	Family	Interproscan
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR010513	Domain	KEN domain	Interproscan
IPR045133	Family	Serine/threonine-protein kinase/endoribonuclease IRE1/2-like	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR038357	Homologous_superfamily	KEN domain superfamily	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13954	IRE1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004540	Molecular Function	RNA nuclease activity	Interproscan
GO:0006397	Biological Process	mRNA processing	Interproscan
GO:0004521	Molecular Function	RNA endonuclease activity	Interproscan
GO:0004674	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0030968	Biological Process	endoplasmic reticulum unfolded protein response	Interproscan
GO:0036498	Biological Process	IRE1-mediated unfolded protein response	Interproscan
GO:0051082	Molecular Function	unfolded protein binding	Interproscan
GO:0070059	Biological Process	intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress	Interproscan
GO:1990604	Cellular Component	IRE1-TRAF2-ASK1 complex	Interproscan
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08267	RICTOR; rapamycin-insensitive companion of mTOR	-	Membrane trafficking	ko04131	deepkoala