Detailed information of alvinactis_v1_g18938 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_9:23613997...23619306
NR annotation: KXJ15017.1, Transposon Ty3-G Gag-Pol polyprotein [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q8I7P9Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03732Retrotrans_gagRetrotransposon gag protein FamilyInterproscan
PF09668Asp_proteaseAspartyl proteaseFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005162DomainRetrotransposon gag domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR019103DomainAspartic peptidase, DDI1-typeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR051320FamilyViral Replication and Maturation PolyproteinInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33064POL PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

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