Gene detail

Detailed information of alvinactis_v1_g18966 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_9:24074135...24088259
NR annotation: XP_020899512.1, homeodomain-interacting protein kinase 2 isoform X1 [Exaiptasia diaphana]
Species abbreviation AIDSS · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

alvinactis_v1_g18966

ATGTGTTCTGCGACTTCCAGGTACGAAGTCTTGGAATTTCTTGGTCGAGGGACGTTCGGACAAGTCATGAAGTGTTGGAAAAAGGGCACCAATGAACTAGTCGCTATTAAGATTTTAAAAGATCACCCCAGCTATGCCAGGCAAGGACAGATCGAAATAAGAATTCTAGCTCAATTGAGTGCTGAAAACTCTGATGCCTTTAATTTTGTCCGCGCGATCGAGTGTTTCCAACACAAAAATCACACTTGTTTGGTCTTCGAGATGTTGCAAAAAAATCTCTATGACTATCTCAAGCAATCCAAGTTTAGCCCTCTACAACTGAAGCACATACGACCGATTGTACAGCAAGTTTTGGTGGCATTATCAAAGCTAAAGTCCCTGGGAATTATACACGCTGACTTGAAGCCCGAAAACATCATGCTAGTTGATCCAGAGAAGCAACCATATCGAGTCAAAGTGATTGATTTTGGGTCTGCAACTCACGTCTCCAAAGCTGTATGTTCCACGTATCTTCAAAGCCGATATTACAGAGCGCCAGAAGTGATAATTGGGCTGCCGTTCACAGAGTCCATCGACATGTGGTCATTGGGTTGTGTTATTGCAGAGttattccttggctggcctctttatccaggttcatctgaatatgaccagATTCGTTACATCTCTCAGACCCAGGGTCTCCCCCACGAATACCTGCTCAACAACGCCACCAAGACAAACAGGTTTTTCAAGAAATATGTTAATAATCAAACCGGTTTATTGGAATGGAAGCTGAAGAGTGGCGGTGAATACGAGAGAGAAAGCAAAATTCCTTCAAAGGAAGCAAGAAAGTACATATTTAATTCCCTGGACGATGCTGCACAAGTCAATTTGTCCAGTAATTTGACAGGAAATGACAGAATCGCAGAGAAAATTGACAGGTATCAATTTGTGTCGTTGCTTAAAAGTATGTTGTCGATTGACCAAGAAAAACGAACGATGCCAGACGAAGCCCTAAACCACCCGTTCATCACTCTGTCTCATCTAATAGAGTTCGCCACCACTAACGTTTTCAAGATGGCGGTCAAGAGTATGGAAGTGTGTTGCCGAAACAGAGGACTTAGCGACCCAGCCACGTACTCGACACCCACTATACTGGGGTACCCCCCTTCGAGTAGTTCGCCATACCTGCCAATGGGACTTGGAGGCAACGAGGGAATCATGGCACAGGAACAGCTTGGTTTGGTACGACGGACTGATCCTTACGTGGCGCGTGTGAATCTAGCGATGCCGTCTTTGCAACCGATGGCTGCAGTGCAGCCAATGACAGACTTCCTACCACCACACTGTGCACCACAGCATGCTATTATATGCCAACCCGAAAATGTCTCGCCTAAAAAGCATGTATTTGGAAGCCAACAGCCTCTTCCAGTCGTGGTTTCAATGGGTTTGCCCACAAACAACATGCCAATGCAGTCATCTGCTGGACTCTACGCCAAAGTACCGAGCGCTCCGATACCGACATGGCCGACAAATCGATTCGGTTCAGATCCAACATTGTCTACTCTTCACCACCAGTGGGCCAGTACCTTGGGCGTTGGCGCTGTGCAACCGATTCTGCAGGACGTCATGCAAGGCATGGAAAACCCGAGTCGACCCATGAATCCTCCACCGTCGGGGGCCTGGCGCGGGTCGGACGATAATGGTTACATATCTGCCGAACCCAGCCCAGGATTGTATCGTATGGAAGGAGATGGTGGCGCGTATGACCGAATACATGATCATCGTCGAGGGCCTGGGCAAGAGCCTTACAGACCCGCAGGCTCAGTTCTGTTCTCGGTAATGCCCATAATGCAACAGCACTCCACCGTCCCGCCTCCAGTGTGGAACGGTCCGCGAATTCCACACAATCTGTTTCCATGGCAACTTCAACCTCCTTCAGTCATGCAGAACCTACCGTTGCACGCCGGGGCCACGGGTAGCCATACGGCACTTCGTAGGACCCTGTCGACCCCCTGCAGGAAACGTGTAAGTGAATACCGGAGTTACTTCACCGGGGAGGCTCCTTGTGAAGATAGTCCATTATTCAGTCATGAAACACCATGTTCTATGAGCGTAACCAAGGAAACGTCTTCGCCAATCGAAATCCCTGACAGCCCTTCTTCTCTTAGTGTCATCACCATTTCTAGCTCAAGCGACGAGATGGAGCCGAATTCGCTTGAAACGAGCGCGATCGCGCAAGGTCTTGCAACTTCCGGCGGAAATGACGACGTCGAGGAAGACCCAGAAGACAACGCGGTCGACCACCAACGGGAAGACAATTTTGACGGCTTCGGAGACGACGAGGACGAGGAGGACGAAGACGACGACTGCGTAGTGACGTCATCTTTCTCCATCGGCAGCGCAAGTCCTGCCATGAACGATTTCACGAGCAATCAACACTCCGGTTACCGTGGCAACGCTGATGACGATGACGTAGTGAGCTCGACGACGGATATGCCTGGAGTGGACGGTTATCAGTCCGACAATCTGTGTTTGCAAGACAATGATAACGATGGACAAATGACGCAGCAAAATGGCTGTCATCTTCACTGCTCAGATACAGAGAGCGCCGACGAGAAAGGCGATACGCAGGATGACATTAATGACATTGTGAATACGCGGAATCGCCATGACAACCATGGTCAGCGGCATTCCTACCAAGCGCCGACGTCATCACGAAACCTACCCGGTTCTCTCGGCATTTTCTCGCATTACCCAGCTCCAGTTATGCCGGCCGCTGGCGCGTATATATCGGCGGCGCTCCCTTATGCTCCACAACAGACTTTGCTCGTGCCAGGACGTGAGCCGCGGTGTTGTGGGGTCAGCGATGTGTACCAAGAGCCTGTGTTCCTTTTACCTCCTACGCATGCGCAAGTTATGCAACAACCGCTGTACACGGGTGTCAATGGCGTACGAATGCCTACCGGAGTACAGGGTCCCGTCCCGTTCACGTACGTCAACCCGACATCGAACGCTACCGGGGCTTTTATCACACCCCTGTCCCAAGCACCGATACTCTCCGGGGAAACTGCCAAGCGCCGATGCAGAATGGAATCGCTATGGCCGGACAGAGCTTCCCTACACAGTTACCGTATACCAATCAGATGTACCAAACCCCGGTACTCGGAGGGTTAA

Transcript

alvinactis_v1_g18966

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9QZR5	Homeodomain-interacting protein kinase 2 OS=Mus musculus OX=10090 GN=Hipk2 PE=1 SV=2
Q9H2X6	Homeodomain-interacting protein kinase 2 OS=Homo sapiens OX=9606 GN=HIPK2 PE=1 SV=2
Q9WUM7	Homeodomain-interacting protein kinase 2 OS=Mesocricetus auratus OX=10036 GN=Hipk2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006106 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR050494 all species →	Family	Serine/threonine and dual-specificity kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24058 all species →	DUAL SPECIFICITY PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0004674 all species →	Molecular Function	protein serine/threonine kinase activity	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0018105 all species →	Biological Process	peptidyl-serine phosphorylation	Interproscan
GO:0018107 all species →	Biological Process	peptidyl-threonine phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08826	HIPK; homeodomain interacting protein kinase	EC:2.7.11.1	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.