Gene detail

Detailed information of alvinactis_v1_g19543 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_10:5258002...5259763
NR annotation: CAH3176836.1, unnamed protein product [Porites lobata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P71359	ATP-dependent DNA helicase RecQ OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=recQ PE=3 SV=1
O93530	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Xenopus laevis OX=8355 GN=wrn PE=1 SV=1
Q19546	ATP-dependent helicase wrn-1 OS=Caenorhabditis elegans OX=6239 GN=wrn-1 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR004589	Family	DNA helicase, ATP-dependent, RecQ type	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004386	Molecular Function	helicase activity	Interproscan
GO:0006310	Biological Process	DNA recombination	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0000724	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005694	Cellular Component	chromosome	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006268	Biological Process	DNA unwinding involved in DNA replication	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0009378	Molecular Function	four-way junction helicase activity	Interproscan
GO:0032508	Biological Process	DNA duplex unwinding	Interproscan
GO:0043138	Molecular Function	3'-5' DNA helicase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03654	recQ; ATP-dependent DNA helicase RecQ	EC:5.6.2.4	DNA repair and recombination proteins	ko03400	deepkoala