Gene detail

Detailed information of alvinactis_v1_g20608 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_10:20832319...20848280
NR annotation: XP_020905835.1, serine/threonine-protein kinase Nek4 isoform X2 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g20608

ATGTCTCTAGAGAAATACACTGTCGAGAAGTTAATAGGTAAAGGAAGCTATGGAGAAGTGTTCCTTGCTAAGCACAAGAAGGATAAGAGAATGTACGTGGTGAAAAAGGTTACACTTCAAAAAGCGTCGGAAAGAGAAAGAAAGGCTGCTGAGCTAGAGGCTCAGTTGCTTTCCCAGCTGCGTCATCCTAACATAGTGTCTTACAGAGAGTCCTTCCAAGGAGATCAAGGGTTTTTGTATATTATAATGAATTATTGTGAAGGTGGTGATCTCTACACCAGACTTAAAGCTCAAAAGTCTTCATTATTAGATGAAGAGCAGATAGTCCAGTGGTTTGTTCAAATTGCTATGGCTTTACAGTACATGCATGAGAAACACATCTTACATCGCGATCTTAAAACTCAGAATATTTTCTTAACAAGAAGCAAAATCATCAAGGTTGGTGATTTAGGGATTGCCAAGGTATTAGAGAACTCATCAGACATGGCTACAACATTGATAGGAACACCATATTACATGTCACCAGAATTGTTTTCAAATAAGCCTTATAACCACAAGTCTGATGTTTGGGCTCTTGGATGTTGTCTTTATGAAATGTGCACCCTAAGACATGCCTTCAATGCTAAGGACATGAGTTCACTGGTTTACAAGATTCTCAAAGGAAAAACTCCACCATTACCCAAGCAATACAGTGCTGATTTGTGTTCCATTATAAGAAACATGCTGGACCAAGATCCTGACAAACGGCCCAGTGTATCTCGTCTATTACGACACCCTTACATTAAGAAGCAGATTGCAAAGTTTTTAGAAGGAACAAAAAACAGACAAAGACAGAAGACAAGCAGTAGTGAGAGGAAGATTGTAGAGATAAGAGCTGCCAATAAAGCATCAATTTCTACATCAGACTCGGGTTATTCTGAGCCCAACCTACAGTCCATTGCAACTGTGTCTGGTGTAGATTGTGTTCTGGAAGACACTGACAAACCCACGCCTGGAAAACCTCATAGTACACCTACTAATGATCATCAAAAACCTATTGAAAGGTCACATTCTGAAAACGATGTGGGACGAGCATCTGTTGACAGTACTCATTCTTCATCCTCATCCAGTGGACAATCGGTGAAAGAACAAACTGAAGTTTATGCACCAACTAAAAATGAAGTCGTAAGTCAAaaagatgagaaagaaagagaaaaagaagcaatcaagaaacaaaTGGCTCAAAGACGAAGAAAGTCTGCCTCTGAGAGGTCTATAAGTAAAGAGCAGTCACCTCAGGTTGTTAGTAAAGGAGTAGAGCATAAACACTGCAGCATAGTAGAAGAGAAGACTCCTGCTAGACGTGTAAGGAGTGCAGGCTCAGACAGACCCCCAATAAATGAGGCCAAGCCTTCAGTAAGGAGCAGACCTTTGCCCAGGCCCCCTGCTCCATCACCCAGTATATCTGTCAGTGAGGTACCAAGGTCAAAAAGTCCTAGAGCCAGGAGACGCTACAAAATTAGTGCAAAGCCACTGTCACTTGAAGAAGAACAGGAAGGAgaagaagatgatgatgataaaagtactgcatcagtggattctgacaggagCTCCCAATCAGTGAGTGAATCGTCCAGTCAGCATTCTGGTTTGTCGGCAAGGGAAAGACGAAGACTGAAGCAGAAAGCCTCGGGATCTCCCCTTCCTAGCCCCTCATCGTACAATACCCCACCCCTCCCCTCTCCTAAGGGAGTTATTGCTGATATACAAAGGAAACGATCGCAAGACCAAGTGTGTAAAGTCAAGAGCGTCCAAAAGTCACGAGAAACTGCCAAGAATTCCCATGACTTGGACTGTGTTGACGGCAGCCCTCCAAGGAAAGCCAATCAAGAAATGGAATCCTTCGATAGCGAAGACTCTGGTTCCGATCTTGAAGAGATCAGCACTGATGAACGTTCTTCTGGGAAATCAAGAAGTAGAAGCGAGGTTAATTCTCTGATATCTGCTCTGGATTCAACATTAAAGTTGGACGATGAAGCAACTGATCGTGTATCACCAGATATAGAAgacgaaccagacaaagctgaaatactcataccaagtgGGGCTTCACCAACCACTTCTGGCAGACTTCGTGATCGTATTGAACGTCTAAAAAGcgagtGTATACGTGGGATAGGAGAAAAGATGTTACTTCGTGCTTACAACATTATCGACTCTATGAACGAGGATGAAGTTGAGGACGAGTTAGTCAAGTTCATGGGGAGAGAACACTTTGAGAAGTATGGTGGTCCAATATGGCAGCTAAAATTTTGCGAGAGCTTCAGAATCAGCTAA

Transcript

alvinactis_v1_g20608

Protein

Uniprot

Uniprot term	Description
P51957	Serine/threonine-protein kinase Nek4 OS=Homo sapiens OX=9606 GN=NEK4 PE=1 SV=2
Q9Z1J2	Serine/threonine-protein kinase Nek4 OS=Mus musculus OX=10090 GN=Nek4 PE=1 SV=1
P51954	Serine/threonine-protein kinase Nek1 OS=Mus musculus OX=10090 GN=Nek1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000719	Domain	Protein kinase domain	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR051131	Family	NEK Ser/Thr protein kinase family, NIMA subfamily	Interproscan
IPR008271	Active_site	Serine/threonine-protein kinase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44899	CAMK FAMILY PROTEIN KINASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K08857	NEK1_4_5; serine/threonine-protein kinase Nek1/4/5	EC:2.7.11.1	Cilium and associated proteins	ko03037	deepkoala