Gene detail

Detailed information of alvinactis_v1_g21186 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_11:4751684...4752766
NR annotation: XP_020917782.1, ELAV-like protein 1-B [Exaiptasia diaphana]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5U259	ELAV-like protein 1-B OS=Xenopus laevis OX=8355 GN=elavl1-b PE=1 SV=1
Q28GD4	ELAV-like protein 2 OS=Xenopus tropicalis OX=8364 GN=elavl2 PE=2 SV=2
Q6GLB5	ELAV-like protein 1 OS=Xenopus tropicalis OX=8364 GN=elavl1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR034775	Domain	Protein elav, RNA recognition motif 1	Interproscan
IPR002343	Family	Paraneoplastic encephalomyelitis antigen	Interproscan
IPR006548	Family	Splicing factor ELAV/Hu	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10352	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13208	ELAVL2_3_4; ELAV like protein 2/3/4	-	Spliceosome	ko03041	deepkoala