Gene detail

Detailed information of alvinactis_v1_g21192 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_11:4809026...4827205
NR annotation: XP_031563653.1, origin recognition complex subunit 1-like isoform X1 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g21192

ATGAGACGACTAATGCTGGTTAATGTTGTGTTCATAGCTGTGTTGAGCGTAGCAAATGCAAGAACATTTCATATGGAGAACTTTATAGAAGACCCAGATGTCCATGGATTCACTTGCAAAGACAAAGAAGACGGCATTTACCAAAATCCTGACGACTGTGCCAGTTTTATTCAATGTGCTAACGGAAGGACATTTCATCAGAAGTGCGCCGAAGGAACAAAGTTTAACGCAAAACTCAAAATCTGTGATTGGCCAGATAATGTGACTTGTCCAGAGTTTTGCGCATCTCGTCCAGATGGCATTTATGCCGATCCTGAGACTTGTAAGGGCTTTATTCATTGCCATAACAACCGGACAGCACGTAAGAAATGCCCTGGTGGCTTACTGTTTAATCCTAAACTAAAGacagacagacggacaggcagacagacagacagacaggcagacaagcaagcaagcagacagacagacagacagatagacagGAAGTGCACAGTACGAGGCATTCCTGTCAAGATCAATGATTACGTCACAGTAAACACAGGCAATTATTCCATTGGCAAAGTGGTTGATCTTCATGACCTTGGAGATTTTCCTGACCGACATCAAGTGAAAATACACTGGCTGTACAGACATGAGGAATTAACCAAAATATGTCGAGATATGCTTGAAAAAAGAACTAACGAACTGTTTGTTCCTGCTAATGATCCAGACAAACGACCAATAATGGGTAGTTTGGAAGTCATGGATGCCGACACTATAATGGACACTTGTGATGTGAAATTTCTGGAAACAAGCCAGGAGTTTCCAACAAGTTGTACAGAAGCCGGCCCTTTTTATGTCCAGTTTGCTTTTGATCTTCACAACAACATCTATTCTGCAGTGGGTTATATGGATGAGTACATATATGCACTGAAGACTGCCGAGGACAAAAATAAATGTATAACTCCAAGGCCTTCAGTCGAAATGAGTACTCCGAAAAGAGAAGAAGAGAGTAGAACCAGGACTGCAAGTACCATACAATGGATTGGAAATAGCACGATAGAGGATGGTAAACTTCATTACTCGAAGTGCACAATACGAGGCATTCCTGTCAAGATCAATGATTACGTCATGGTGAACACAGGCAATGATTCCATTGGCAAAGTGGTTGATCTTCATGACCTTGGAGATTTTCCTGACCGACATCGATTGAAAATACACTGGCTGTATTATTATGATGATTTAACCAAAATATGTCAAGATATGCTTGAAAGAAGAACTAACGAACTGTTTGTTCCTGCTAATGATCCAGACAAACGACCAATAATGGGTAGTTTGGAAGTCATGGATGCCAAGACCATAATGGATACTTGTGAGGTGGAATTTCTGGAAACAGGCCAGGAGTTTCCAACAAGTTGTACAGAAGCCGGCCCTTTTTATGTCCAGTTTGCTTTTGATCTTCACAACAACATTTATTCTGCAGTGGGTTATATGGATGAGTACATATATGCACTGAAGACTGCCAAGGACAAAAATAAATGTAGAACTCCAAGGCCTTCAGAGAAGCAATGGAGAGTTGGAACACCAAAGCAAGTCAATTGTAGTTATAGTCCATTTTCTCTTAAACCCCTGCAAATCATGTTAAAGGCTATAAAACCTGATAAGACGAGTAACAAGACACCGTCAAAAAGAAAAGCCAGTAAAAGTGTACCTGACGAGGGAgaagtggtgtgcaagagaagtaaagtgaagACAAAAACAAAACAGACGCAAGATAGACATCAGAGCAAGGGAACACCAGAGACATTACAGTCTCCCAAAACTCATTTCAAAACTGATGAAGTTATAGAAATGGTTTGGTCTAGTGATGACGAGTCACAGGAAGACGTCGACACTGACGATAATGAAGTCTTTTTTAAAGAGAGAACACCAAGGAGGAAAACCTCCACAAGAACAACAAGAGACCAAAGTAGAGTGACAGAAACACCAACTCCCAAAGACACAGTGCAATCTGGGAAGGATAACAGAAGATCAAGTTCCAGGGTACCCCCCAACGATCTCTCCAAAAATCAATACCAGACCCCTAAAGGTACATCACGGTCAAAATCAACCACAGGTAGACCAACTCCGCTTGCTGCTAAAAATACACCAAAAACTGTGTCTAGCAATaagacaccaatgcaaactacgaagacaccaatacagactactagtagaagtcatactgctaaaactacatctagcaagaagacaccaatacagactactagtagaagtcatactgctaaaactacatctagcaagaagacaccagtgcagaagacaccaatgcaAACTACTAATAGAAGAAAATCATCAACGGTGGCCACAGACATGCTTGCCGGTAACATAACACCAAAGAAAACCCCAAGAAGAACAGGAAGAAAAAGCTTAGCAGAAGGTTTGACACCTAGTATACCTTGTAGATCAGAACCATGTAAGACACCAAGGACGCCATTACAAGAGGCAAGGTCTAGactgcatgtttctgctgtgcctccatcattgccttGCCGGGAAGATGAATTTGCTGACATCCTTGGGTTTGTTGAGGGGAAACTGATTGAAGACAATGGAGGGTGTATGTACATATCTGGAGTGCCAGGAACTGGAAAAACAGCAACAGTACACGAAGTAATACGAGTCCTACAAGAATCCAGTGATGATGATATTCCTGAATTCAAGTTTATTGAAATTAACGGGATGAAATTAACAGAACCCAATCAAGCATATAGCATGCTACTTAAGAAACTGACGGGTCAAAAGGCTACACCTGCGCATGCATCAGATTTACTAGAAAAACTGTTCACGGAAAAAGATGCAAAGAAAGAAAATTTGGTGCTAGTGGTTGATGAACTCGACTTGTTATGGACTCGCAAACAAGGTGTCATGTACAACTTATTTGAATGGCCTTCAAGATGTCACTCAAAACTTATTGTACTAGCCATTGCTAATACTATGGATCTACCAGAGAGAATGATGATTAACAGAGTACAGAGCAGGCtgGGCCTGACAAGAATCACTTTCCAGCCATACACGTTCTCACAACTACAAGAGATTGTTCTATCGCGTATCCAGTACCTAAACGTGTTTGATCCTGATGCTATACAACTTGTAGCAAGAAAGGTAGCCTCCGTGTCTGGTGATGCGCGTCGCTGTCTAGACATATGTCGACGTGCTGTCGAAATCACTGAACAAGAAGACAAGTCAGGATCAAAGCAGGGAAATCTTGTTGGAGTGACTGAAGTCGATGCTGCTTTACAAGACATGTTTTCGTCGCCCAAGATAAAACTTATGATGAATTTATCGTCTTATGAGAGATTGTTACTGAGAGCAGTTCTCACCGAGTTCAAGAGGACTGGGATCGAGGAAACTATGTTTGGTGAGGTTTTTGATGAATTGTGTAATCATTGTCGATTAGAAGGAATCACCACGCCCAGTATGACAGAAGCATCAGCAATTGTGAGCCGAATTGGTGCAAGTAGACTTCTTTTGGTAGAAAGAGGACGCATGGACTTACAGCGAAGAATAAGTTTGAAC

Transcript

alvinactis_v1_g21192

Protein

Uniprot

Uniprot term	Description
Q9Z1N2	Origin recognition complex subunit 1 OS=Mus musculus OX=10090 GN=Orc1 PE=1 SV=2
Q80Z32	Origin recognition complex subunit 1 OS=Rattus norvegicus OX=10116 GN=Orc1 PE=2 SV=1
Q13415	Origin recognition complex subunit 1 OS=Homo sapiens OX=9606 GN=ORC1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF17872	AAA_lid_10	AAA lid domain	Domain	Interproscan
PF01607	CBM_14	Chitin binding Peritrophin-A domain	Domain	Interproscan
PF09079	Cdc6_C	CDC6, C terminal winged helix domain	Domain	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001025	Domain	Bromo adjacent homology (BAH) domain	Interproscan
IPR036508	Homologous_superfamily	Chitin binding domain superfamily	Interproscan
IPR002557	Domain	Chitin binding domain	Interproscan
IPR041083	Domain	AAA lid domain	Interproscan
IPR050311	Family	Origin Recognition Complex 1/Cell Division Control Protein 6	Interproscan
IPR015163	Domain	Cdc6, C-terminal	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR043151	Homologous_superfamily	Bromo adjacent homology (BAH) domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10763	CELL DIVISION CONTROL PROTEIN 6-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003682	Molecular Function	chromatin binding	Interproscan
GO:0008061	Molecular Function	chitin binding	Interproscan
GO:0005576	Cellular Component	extracellular region	Interproscan
GO:0003688	Molecular Function	DNA replication origin binding	Interproscan
GO:0005664	Cellular Component	nuclear origin of replication recognition complex	Interproscan
GO:0006270	Biological Process	DNA replication initiation	Interproscan
GO:0033314	Biological Process	mitotic DNA replication checkpoint signaling	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan