Detailed information of alvinactis_v1_g21418 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_11:8266726...8294937
NR annotation: KXJ20835.1, Collagen alpha-1(XII) chain [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2M2T6PAT complex subunit Asterix OS=Bos taurus OX=9913 GN=WDR83OS PE=3 SV=1
A0A8I3NQW8PAT complex subunit Asterix OS=Canis lupus familiaris OX=9615 GN=WDR83OS PE=1 SV=1
Q9Y284PAT complex subunit Asterix OS=Homo sapiens OX=9606 GN=WDR83OS PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00040fn2Fibronectin type II domainDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF03669ASTERPAT complex subunit AsterixFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR000562DomainFibronectin type II domainInterproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR005351FamilyPAT complex subunit AsterixInterproscan
IPR050525FamilyExtracellular Matrix Assembly and OrganizationInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24020COLLAGEN ALPHAInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0044183Molecular Functionprotein folding chaperoneInterproscan
GO:0045048Biological Processprotein insertion into ER membraneInterproscan

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