Gene detail

Detailed information of alvinactis_v1_g21948 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_11:16773798...16781853
NR annotation: XP_020622161.1, uncharacterized protein LOC110059780 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g21948

ATGGTCGGATCTAAAGATAAAAATCGTTATAGAAAATCAAGGCAAGGTAAAGGATTTGCGGGAGTTCCAAAATGGGCTGAAATACACGCAGAAACTCATTCGGATCAGAACGAAAACCTTCATGATCCGCAGCCGAAATCGAGTGGATGTCGAGTCATTGCAGATGCTGCGAAGGGCCAACCGACTAGCGCCTCCAGAAAAAAGCTGTCTGATCACGGTTATCAAGACTCAGATAGTTCTTATGAAGAGGAAGAGGATCTAATTGGAAATGGTTACAGACTGGTAGATATAAACTCTCTGTCTTCTTCTCTTTGTGATCTGCATAAcctccaccCAtcaagggctgggttgatgtcagccttctctctagaatgtagctcttgtgagcaagctacatctttgcagacatctgctactataacccaaagaggaaggtcatttgatgtaaatagaagagctgtttatcattctcttgaaacaggcagtgggtacgaaggacaggcatctttttgcagcattatgaacatgccttgcatatccaaggtagcctattacaaacagcttgaagtaataatggaggctcaggaagatgaagcacaagaagaaatgaacagagcagggcaaaagcttcgtcaaacagtattagaggaaagcgatgaacaagacatcaatgctgtggttgatgttgcggtgagcttcgatgggacgtgggcaaaacgtggattttcgtcattaattggagtagtgtttgtaatatctgtagatacgggggaggtactggactgtcatgttctatcaaaggcatgtcaacaatgtgccttgaagaagacaaagtgtggagaagacaataaaacattcgacgattggaaaacacagcatatagccaatggggaatgtgacattaacttcactggaaggtcaccagccatggaagctgaaggagctgctataatctggggacgatcgatagagcgccacaatatgagatacaagtggatggtctctgatggtgatagtaaagcctttaattctgtagagatgacgtatgagggatacaaagttgaaaaacttgactgtgtcaggcacgtacaaaagcggatgggaaaacatctctttaatctgaaggcaagaaccaaaggaaaactggccgatggcaagtcaattggagggaagggaaggctcacagaaataaaaatcaaacagcttcaaaggtattatggtcttgctattcgtcaaaacaccataaccggggtaaacccaactgatgaagaaatagacattgcagtatataccatgaaaaaaaatattattgcagttctaactcacaatgtgcagtcagatagcctagctcatcaacaccaatattgccctactggtgagacgtcatggtgcaagtggaagcacgatttggtgatgggaacaacaacatacaaaggagataactgtttgccaagggtattcctggaagtactccgccctgtgtttatcggtttgagtgatatgcggtgtcccaaacataaacaccatagtgcgaaagtggttcgttttgctgtggcctctgctgtgtgccatttccatggtggagctcttagtagagagagggtaatgcagaggctagcaatacctgctggaacccgcacaagagaagcttctaacaccaaggacaaaaaaagggtcagacagtcagatttggaaacctccaagaaacaaaagaaacgtcaacaaggggaacagctaaggcgcacccgtagagaggaagcacttcgagaggctgaagacaccacttatgaagcaggaggcttcAAAATTGATAATGTATTGAAATTTCTGTTCAAATACAAAACCCCTAGCATTACAATTgagctacgctctggcaatggcaccaactttgtcgcggcagagcgagaactccgtgaggccatcaaacagtggaaccaggatcagatcaccatcgagttgcaacagcgcaaatgcgactgggtattccatccccctggtgcttctcacatgtcaggtgtgtgggagcgtctgataagatgtataaagagatccttgaaggctattctggGTAATGCACATAACCAGCTACAACATCTTCTCGCCCCTATGGATGTCCCCTTTCTCCACCACAAGTCATTCAAAGATATTGAAAGAAGAGTGGGACCAAAAATTGAACAAGTTGCCAAAGAAAGCTGCAAAAAATGGCTGGAGACGGAAGTACAGATAACAGGAAGCCAAGATGATGCCATCTCATTTGACATGGGGTGGCAAAAAAGAGGTTGTCGTATATGTGAGAATGCAGAACAAGAAAACAACACACCCAAAGCTCACGATTGCAGGAAAAAACACCAAGGCAGTGCTAAATCCATGGAAGCTACAGCAACTGTTGATATATCCAGCCAGTACAAGCACAATGGCTTACCCAATGGCCATAATCTTCAGGGTGCAGCTTTGCGCAAGTGTCTGACCAATATCCTAAAGAAATACACAACACCAGAAATGTTGAAGAAAATTGCTCCATTATCATCTtcacaagcaaatgaaagtgcaaatagtgttattgagagcaagagtctgaaaatacgacactatggtggaagtgagagtaatgatttcagggttgctgctggagtagcacaaatcaacgaagGATGCGGGTACATCAGTAGTGTCTTGCAAGGAATAGGTATCTCAAGTCGTACTGCGTGCAAAAGCTATGTAAAGCGAGTCATTGCCAACCAAACACTGGAGAAGAAACGAAAATCATCTAAGAAATTCAAAAGTCAAAGAAGAAACCTTTTGCTCACTCATCGGGCAAAAGGAAAGTCAAAGGGAAAAAAAGGAGTTACCTACGAATCAGGAATCGCGATTGAGCTTAGTTCTATAGAACATGAGGTATCCGAAATCATTGGTAAAGTCCAAACAACAGATGTTCAAAAAGCCATGGACATAGCATATCCAGACCAACAAAGTCATGAAAAACCCTTGCTATCGATCACAAGAAAAGCTTCCATCAGATGCTGCAGTTATCTTCCTCGATCTGGAAACTACAAGCAGATCCAAAGACTGTGA

Transcript

alvinactis_v1_g21948

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20700	Mutator	Mutator-like transposase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR049012	Domain	Mutator-like transposase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33309	KERATIN, ULTRA HIGH-SULFUR MATRIX PROTEIN-LIKE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan