Detailed information of alvinactis_v1_g22653 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_12:1493061...1507207
NR annotation: XP_031552111.1, roundabout homolog 1-like isoform X1 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P47972Neuronal pentraxin-2 OS=Homo sapiens OX=9606 GN=NPTX2 PE=1 SV=2
O70340Neuronal pentraxin-2 OS=Mus musculus OX=10090 GN=Nptx2 PE=1 SV=1
P97738Neuronal pentraxin-2 OS=Rattus norvegicus OX=10116 GN=Nptx2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001759FamilyPentraxin-relatedInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR051360FamilyNeuronal Pentraxin and RelatedInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19277PENTRAXINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
----

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08453ADGRF1, GPR110; adhesion G-protein coupled receptor F1-G protein-coupled receptorsko04030deepkoala

TOP