Detailed information of alvinactis_v1_g23346 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_12:14076446...14090972
NR annotation: XP_020629946.1, uncharacterized protein LOC110067018 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7LHG5Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2
Q99315Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00385ChromoChromo (CHRromatin Organisation MOdifier) domainDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF03732Retrotrans_gagRetrotransposon gag protein FamilyInterproscan
PF09668Asp_proteaseAspartyl proteaseFamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR023780DomainChromo domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR000953DomainChromo/chromo shadow domainInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR001190DomainSRCR domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR005162DomainRetrotransposon gag domainInterproscan
IPR023779Conserved_siteChromo domain, conserved siteInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050686FamilySRCR-S1 Scavenger ReceptorInterproscan
IPR016197Homologous_superfamilyChromo-like domain superfamilyInterproscan
IPR019103DomainAspartic peptidase, DDI1-typeInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48071SRCR DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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