Gene detail

Detailed information of alvinactis_v1_g24777 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_13:8830452...8851662
NR annotation: XP_020915547.1, apoptotic chromatin condensation inducer in the nucleus isoform X1 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g24777

ATGGCGGAGATCGGTGATGAGTTTTTGATCGGCGGTCGAAAATTAGCACAGCTAAAAAACGATGAACTAAAGCAGGAGTTGGAGAAAAGGGGCTTGAAGAAAAGCGGAAACAAGGCGGTACTTGTTGAGAGACTGAGCGAGTATTTGTTTAAAGAGTTGTATGAAAATCAGAAACCAGAACCCGTTCAACAATCTGCACCTCAACAGCCAGTCCAGCAAGCTATTCCTCAGCAACAAGTTGCATTTCATGACCAGGCAATCGCACAACAGCCGAGTGTCCAGCCGCAGACTTTACACCAGCAAACCTCGTTTCCTGGCCAACAGTTTCCACACTTAACTCCACAGCAAATTCCTGGACAGCAGCAGAGTGTGCAGTACCAGCAATTTGGCCAACAGCAGGTACCTTTCTATCATCAGTCAGGTGATCAGTCGCCGTCAGGTTTGTTTGATTCAAGTAGACAACACCAGACAGCCTTACATTCACCTCAAAACCAGACACATCAACAGCAGATCCTTCATCAATTGCCTGGTCAAAATCCTGGAATACAGCAACAAATGAATCAACAACAACTGCAACGTCAACAAAATGTGTTACCAGATAACTTCTTTCCACAAGTGAACCACCAATCCCCGCCACAGCAGCAGAGGTCGCCGTTTGCTCAAGCAGAGTTCCAGCAAGGCCACCAAGAACAATTTCTGCAGCACTTGATTCCTGGCCAAAGTTTTGAGTCCCAACAACTTGGTACGCAACAACAACAAGCCTTCCCTGTCCAACAAGTAGAGAGAAATGTCATACAGCATCAAGAGCCGTCTGCAGGACCTTCAGTCATCCAGTCTAGCCAAGAGGGTGATGTAAAGCATATTGAAGACACTACTAATCAACAGGTTGGTTCTGAACCAATGGCTGATGAGGCTCCTGACGAATCATCCTCCTCCTCCTCAACAATCATTGATGAGCCAGAGCAAACACCTGCAGCAGAAGAACCACAAACAGTGGAAAAACAGGAGGTAGCAATGAATGAACAAGATGACTCATCATCAAGCAGCAGTGGCAGCAGTTCTAGCCAACAACCTTCACCTGTGGAAAGAAGTGAAGAGCCATCTCCTGCTGCAGAACAAGACAAAGATGACCAAtcttcctcctcctcctcctcgtcAGCTGGAGATGAGGAACAATCACCAGTCCAACCAGAAAGAAGTGCACTCAACCAAGAAGCACCTCCCCCCAAAGAGGAGACAACTGAAGCCCTTCCTTCAGAGGAAACCAAGGAAGAAGAAACTCCTGCTGCAGAGAAGATGGAGGAGAGTCCAAATGATGGCAGTGGACTAGAGGAAGGAGAGGTTGATGCTAGCAGTAATGAGGACAGCAAGGAATGTAAAGAAGAACCAAGTAATGAGCCACAGATTGTTATGGAACCAACTGAGGAAGAAAAAGCAGTGGTTGACGAACCAAAGCCAGTTGAAAAGAAGACAAGAACACCATTGATTACAAAGAAGCGCAAAATCTCAATACCCTCCACAGGATCTACACCCGTCACACCACCCACCGATGGACCAAAGAGGAGAAGATGGGGTTCAGCATCCAAGTCATCAAAACCAATTAGTACCGAATCACTTAAAGACCTAATTCCTGGTGTCCAGGTTCACTCAACCCCAGCGTTTGAAGCCGTGATGGATTTTGGTAATGAAGACCAGGATGATGGTGATGAGAAAGAAACAGGAGAAGTGGTTGATAATGATGACACCGACAAAGAAAACAAGGACAAAGACGCTATAGAACAGGAGGCAGAGCGACCAGAACCTGAGACTAAGAAAAGGAAAGAGCGTATAGTTAAGTTAGAGGAAGGACGCAGGAAGATTAAAATCAAAAATCATACTGCGGAACTGGATGAGGTCAAAGGTGAAGTGAAAATGGATGTTGAAGAAGTTCGTCCTACATTGCCCAAAACAGAACCAAGACTGCCCACAATACCCATCCTAACCCAGTCACCTGTACGAGCCGAGCGATCGCCGTCGCCTGCCAGAAACACAGAAAGTGTCAACATTCATGTGAAAAATCTTGTGAGGCCGTTTACACTGAACCAACTGAAGGAGCTGCTTGGAAAATCTGGAACTTTAGTGGACGACGGATTTTGGATTGACAAAATCAAATCTCATTGCTATGCAGTGTATTCAGACATCGAGGGTGCCAGAGCTACAAGAGCCGTTCTACATGGTGTCAAGTGGCCCCCTACCAGCCCGAAAATACTTAGTGTGGAATATGAAGATCATCAGCAGATGGCACATGATACAGATGGTACCTTGGGGAAGAAATCCAGTGACGATGATGCAACTGTTAATAAACAAGAACAAGATATAGAGAAACCTCGCGAGGCAGAAGAAGAAAAAGAGAAAAGGATGGCTGAGGAGGATAACAGCCCAGCAGACTTGTTAGACAATTTATTCCGTAAAACCAAGACTACGCCTTGTCTATACTGGTTGCCATTGACAACAGAACAGATTGTTAAACGAGACAAGGAGAGAGAAGATAAGCGCAAACGACGCGAAGAGGAAAGGAAACGAGAAGACGAAGAAATAGAAAAGAGACGAGAAgaacgggacaaggagcgggaaaaagaaagggagcaggagcgggaacgtgaaaaggagcgcgaacAAGCGAGAAGTCGTGCGCGTAATAACTCACGTGACAGATCACGTGATAACCGTGGAAGAATGCGATCTCGGTCGCCAGTAAGACGACGGCAGATGTCGcgtagtcgaagtcgaagccgtagttggaataacagacgaaaCTTTAAATTTGCTCATGATTATGACGAAGTGGAAGAGATTTGCAAGACCATCAAAAACCAAACAAGCTATGAACCAACCATTGGTGTGATATGTGGTTCAGGACTTTCTGCTTTGGGGGATATGTTAGAAAAGAAGGATGTCATTCCCTATGAGAAGATCCCTCAGTTTCCAAGAAGCACAGTACCAGGTCATAAAGGACAACTAGTGTTTGGTAGCCTCGGTGGAAAAACCATTGTGATGATGCAGGGTCGATGCCATCTGTATGAAGGATATAATGCAGGAGAGATAACACTCCCAGTGCGAGTGATGGCTCACCTTGGAATAAAGACTTTACTTGTGACCAATGCCGCTGGTGGTTTGAGGCAGGATTGGAACGTTGGTGACATCATGATCATCAAGGATCATATTAACTTAGCAGGACTGACAGGACAGAGTCCACTGCGGGGCAGGAATGATGACAGGATGGGGTTACGATTTCCAGCATTATCCACTGCATATGACAAATGCCTCAGACTTCTAGCACAGAGCACAGCTAAAGAGTTAGGATTTGAGTCTTTTGTCAGGACTGGAGTGTATACAGCACAAGTGGGACCTGCCTTTGAAACACCCGCAGAATGCCGATACTTGAAAAATATTGGATCTGATGCAGTTGGTATGAGTACAGTCCACGAGGTCGTTGTAGCAGTGCATGCAGGTATTAAAGTACTTGGGATATCCTTGATAACAAATATAGCAGTATTAGACTATGCTGATGATGTACAAGCAGCCAACCACGAGGAGGTATTAGAGGCTGGCAAACAGAGAGCACCTGATATGCAGAAATTGGTCTCGACTATTTTGAGTAAGTTGTCCTAA

Transcript

alvinactis_v1_g24777

Protein

Uniprot

Uniprot term	Description
P00491	Purine nucleoside phosphorylase OS=Homo sapiens OX=9606 GN=PNP PE=1 SV=2
P55859	Purine nucleoside phosphorylase OS=Bos taurus OX=9913 GN=PNP PE=1 SV=3
P23492	Purine nucleoside phosphorylase OS=Mus musculus OX=10090 GN=Pnp PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01048	PNP_UDP_1	Phosphorylase superfamily	Domain	Interproscan
PF16294	RSB_motif	RNSP1-SAP18 binding (RSB) motif	Motif	Interproscan
PF02037	SAP	SAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000845	Domain	Nucleoside phosphorylase domain	Interproscan
IPR003034	Domain	SAP domain	Interproscan
IPR035994	Homologous_superfamily	Nucleoside phosphorylase superfamily	Interproscan
IPR011268	Family	Purine nucleoside phosphorylase	Interproscan
IPR032552	Conserved_site	Acin1, RNSP1-SAP18 binding (RSB) motif	Interproscan
IPR034257	Domain	Acinus, RNA recognition motif	Interproscan
IPR011270	Family	Purine nucleoside phosphorylase I, inosine/guanosine-specific	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR036361	Homologous_superfamily	SAP domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11904	METHYLTHIOADENOSINE/PURINE NUCLEOSIDE PHOSPHORYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009116	Biological Process	nucleoside metabolic process	Interproscan
GO:0004731	Molecular Function	purine-nucleoside phosphorylase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006139	Biological Process	nucleobase-containing compound metabolic process	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00757	udp, UPP; uridine phosphorylase	EC:2.4.2.3	Drug metabolism - other enzymes	ko00983	deepkoala