Gene detail

Detailed information of alvinactis_v1_g25277 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_13:14953399...14959039
NR annotation: XP_044174670.1, uncharacterized protein LOC122958162 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g25277

ATGTACGAGTGTGTGGTCAGTAAGAATCACGTTACCTGCACCTGCCAAGCCTACCATTACAACAATGTATGCAAGCATAGCTTAGTTGTGGCAGAAAAGATGAATGTTCTTCGAGAGCATTTGGATATCCTTGCTAAGTCATCCAGACTAGCAAAACCTTCAAGATATTGGCTCATCAAACCGCCTTCTGAAGTAGCAGGCATGAAAGGTGGACAACACAAGAACCAGTGGCGGAAACCACAAGCAGACCCTCTATCCAACAGAGTTCAAGCCCTCCCCAAGCGACCCTACACTGAGATCCATCACAATGACAATCCCATAAATGTTGTTTTCCTTGACGATTTCCCAAAAGCACTAAACTGCAAACAATGTGGTGTCACATTTCCACGGAAGAATAAGACAATTCCTTATGACATTGTTTCATCCCATGAAGAAAGAAAATGGCTGTATCCAGATCCTAACATTTGGGAAAACAAATTGCCATCATCTCATTATACTGTCCGATTCTACTGCGCCGTAGAGATGGAAGTATTTACAAACCAGTCTACAGCATTTGTTTCTGACTGGCTTTGCCAGTCGGGGCTGGAAAAACTTGTTGATGTATTTGAAGACAATGAAATAGATGGCAATGCATTTCAACTTCTTAATGCGGAGTCATTGAATGCTATGATAAAGAAGCAGGGACTTTTACTCAAATTTCAGCAAAAGTATAGGCAACTAGCTAGATTCGAAGAAGCCCCTCAAATTGCAACCACTACTGAAGGCGAAAATACCGAAGTCAGAAATGAAACCATACTAGATGAAACCACTGAAATTGAAAACCCTGACATCCCAATATTTTCTGTCGAAGGAAAATCACAAAAGCTATTGTGTTCTCTCGAACTTCAATCTCTGACGGGAGAAAGTATTGCAAAACAAAAGGCGATTTCTGAGGCCATCCATGTGAAGGAGTTCAGCAAATGCTCAAATCTCCACACGGAGTTGCGCACACTTTTTGGACAAAGGAATCAAGTTCAAAAAAAGCTTTCAGACTTACAAAAGAAGCAGGCGCAACATCTCAAGTATGTAGCAAACACAAACCTTAACCTCAAGAGATCAAAGAAAAGAGAGGACACAGAAGTAAAAGAGCCGAAATTGGACATAAGGTCCTTCTTGCAGGTGAAGGGAGCCGCCACTGAAAGTCGACAGGAATCAGATCCTTATGATGAAAATGATGGCAATGAAAGTGGAGACACTGTCATCCTAAGCATCGACGATGATGAAAGGGGAAGTGCTTCAAAAAAAAGAAAACTGGAATATAAAGACGGCAAGgacaagcaagccggtgacaaggtgattggagacaagcaggtcggtgacaaggtgattggagacaagcaggtatgtgacaaggtgattggagacaagcaggtcggtgacaaggtgattggagacaagcaggtcggtgacaaggtgattggagacaagcaggtcggtgacaaggtgattggagacaagcaggtcggtgacaaggtgattggagacaagcagatcggtgacaaggtgattggagacaagcaggtcggtgacaaggtgattggagacaagcaggtcggtaacaaggtgattggagacaagcaggtcagtgacaaggtgattggagacaagcaggtcggtgacaaggtgattggaaacaagcaagttggtgacaaggtgattggagacaagcaggtcggtgacaaggtgattggagacaagcaggtcgatgacaagatgattggagacaagcaggtcgatgacaagatgattggagacaagcaggtcggtgacGGTATTGAAAATACTCAGGAGAGTAACAATTATTTTTTATACCTTCCGAATCCCAGAAAGCACTTGATCTGGGAAAACAGCAGTCACAAACAGAGTTACAGAGTCCCTCGATCTAACAGACAAAAAACTTCAAAAAGATTTCAGAAAACACTAGTCAGCTTGATTGAATATTTGTTGGCCAAGGAAGCTAAATGTATTAACATTCACAACCGAGATTGCACACCATGTACTAACATGATTAATGCTGGAAAGCTTGTTCTTGAGAGTAACTCCACTGTGCCTTTATCCTATCTCTAG

Transcript

alvinactis_v1_g25277

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00536	SAM_1	SAM domain (Sterile alpha motif)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007527	Domain	Zinc finger, SWIM-type	Interproscan
IPR013761	Homologous_superfamily	Sterile alpha motif/pointed domain superfamily	Interproscan
IPR001660	Domain	Sterile alpha motif domain	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan