Gene detail

Detailed information of alvinactis_v1_g25563 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_13:19760304...19760960
NR annotation: CAB4027767.1, paired box Pax-5-like [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P47236	Paired box protein Pax-1 (Fragment) OS=Gallus gallus OX=9031 GN=PAX1 PE=3 SV=1
P55166	Paired box protein Pax-9 (Fragment) OS=Gallus gallus OX=9031 GN=PAX9 PE=2 SV=1
Q2VL59	Paired box protein Pax-9 OS=Callimico goeldii OX=9495 GN=PAX9 PE=3 SV=1

Gene family	Subfamily
Transcription Factors Family	PAX

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00292	PAX	'Paired box' domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR043565	Family	PAX family	Interproscan
IPR001523	Domain	Paired domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45636	PAIRED BOX PROTEIN PAX-6-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0048856	Biological Process	anatomical structure development	Interproscan