Detailed information of alvinactis_v1_g2597 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_1:42571652...42616412
NR annotation: XP_028516844.1, uncharacterized protein LOC110245675 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3EWZ3Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
A2VEC9SCO-spondin OS=Homo sapiens OX=9606 GN=SSPOP PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01390SEASEA domainFamilyInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000082DomainSEA domainInterproscan
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR052065FamilyComplement and asymmetry regulatorInterproscan
IPR013099DomainPotassium channel domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22906PROPERDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

TOP