Gene detail

Detailed information of alvinactis_v1_g26248 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_14:2857588...2860446
NR annotation: XP_020898203.1, ficolin-1 [Exaiptasia diaphana]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5M8C6	Fibrinogen-like protein 1 OS=Rattus norvegicus OX=10116 GN=Fgl1 PE=2 SV=1
Q71KU9	Fibrinogen-like protein 1 OS=Mus musculus OX=10090 GN=Fgl1 PE=1 SV=2
P86239	Fibrinogen-like protein 1 OS=Mesocricetus auratus OX=10036 GN=FGL1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF00147	Fibrinogen_C	Fibrinogen beta and gamma chains, C-terminal globular domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR020837	Conserved_site	Fibrinogen, conserved site	Interproscan
IPR002181	Domain	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Interproscan
IPR014716	Homologous_superfamily	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Interproscan
IPR050373	Family	Fibrinogen C-terminal domain-containing protein	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR036056	Homologous_superfamily	Fibrinogen-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19143	FIBRINOGEN/TENASCIN/ANGIOPOEITIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0062023	Cellular Component	collagen-containing extracellular matrix	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K10104	FCN; ficolin	-	Lectins	ko04091	deepkoala