Gene detail

Detailed information of alvinactis_v1_g2711 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_1:45636910...45652740
NR annotation: XP_020898742.1, aspartate--tRNA ligase, cytoplasmic [Exaiptasia diaphana]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P15178	Aspartate--tRNA ligase, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dars1 PE=1 SV=1
Q5R9I5	Aspartate--tRNA ligase, cytoplasmic OS=Pongo abelii OX=9601 GN=DARS1 PE=2 SV=1
Q922B2	Aspartate--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Dars1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00152	tRNA-synt_2	tRNA synthetases class II (D, K and N)	Domain	Interproscan
PF01336	tRNA_anti-codon	OB-fold nucleic acid binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002312	Family	Aspartyl/Asparaginyl-tRNA synthetase, class IIb	Interproscan
IPR006195	Domain	Aminoacyl-tRNA synthetase, class II	Interproscan
IPR004364	Domain	Aminoacyl-tRNA synthetase, class II (D/K/N)	Interproscan
IPR004365	Domain	OB-fold nucleic acid binding domain, AA-tRNA synthetase-type	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR045864	Homologous_superfamily	Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)	Interproscan
IPR004523	Family	Aspartate-tRNA synthetase, type 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43450	ASPARTYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004815	Molecular Function	aspartate-tRNA ligase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006422	Biological Process	aspartyl-tRNA aminoacylation	Interproscan
GO:0017101	Cellular Component	aminoacyl-tRNA synthetase multienzyme complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22503	DARS1; aspartyl-tRNA synthetase	EC:6.1.1.12	Transfer RNA biogenesis	ko03016	deepkoala