Gene detail

Detailed information of alvinactis_v1_g2783 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_2:469773...533280
NR annotation: XP_028519286.1, DENN domain-containing protein 3 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g2783

ATGGACGTCCCATTAATGCCTACAAAGCTGCATGATAGCTTAATAGACATGTGTATTGTAGTTGGTATGGATCAAGACACAGGATTGGTACTTGTCCCGAGCAAGGAGAGGAAGACTCCAGGCTCTGATGACAAGGACTCACCACTTTACAAGTCATATTTTAAGCCATTTGTACTGGCAGCTTTATCTGGTGAAGCAGCAGTTTTCATGCACACGACAGTTGAGATTGATGGAAGTCCATTCTATCCACCAGGAGCAGTGTCAGTCTGTACCCCCATTAAAAAGGGGGCAAAACCACGACGTGTGTCATTGGGTCCCGGGGTAGGTGGAGCAATGCTGCCTATTCCTACTGAGGTCATAAGCAGCCTACCACTACTATGTTTGCCAGATGGTGGTCAGATCTATGATGCCCCAAAAGATAGCACAGTTCATTACTTGGTTCTGACAGACATTGAAGGAACCAGGACCTACTGTTGTTGTTTGAAGATCTACAAACCTTACATGACTAAAGAGAATGAATTCATCCCTGGCCAGTATGATCTTGTTTATGCCGACTCTGACAGTGATGTTGAAGCCACAAGAGATTCTGACTACACTACATGCTATGTACCACTATGTTGTTGTATCATATCCAAGTATCCATACTTTGGGATTTTCAaagactgcttgtccagTATGGTATCCACCCTTAAAGTTGAGCCAAGGAAGTTCAGGACTGGAATAATGCAGTTTGTTTCTCAGTTGGCAATGGTTCCTATACCACCACCTGGGTTACTGGCAATTGAATTCAACTTGAGTGGCATTACTCACTTGGTACGACCTGTTGATGAACCTGAAAAGAAGATTGTGGATATTGAACTCCATTACCCGTTCATGCTGTTCTCGTTGGATAACATATTGGTCCTCATTAGCTGTGTTCTTACTCAACAAAGAATGGTATTCATGTCATCTAAATACGCGATGTTAACCTTGGTGATAGAGAGTATCTTTGCATTCATTCAGCCTCTTTCCTGGAGCTGGACGTATGTTCCTGTTTTACCAAATGACcttgtagacatgacagaggcgcctggtgtatatatattgggatgtcatatcatccttaaagcgcagatagagagagcaatggcgatgcatgagATGGCTGATATCATCATTGTTAATATCGATGAAGGCTCTATCACAATGGGAGAGAACGTCACAGTACACATCATTCCCTCCCGTGTTGGTGATCTCTTTAAGGCCAGAATGAAGGATGTCTCGCCTCTGTTTGACTTACAGATTATGAACAGGCCCTCGTTTTTAAATGTACAAGACTTGAAAAAAGAACGGAATCGGTTTGCTATGGAATTCAACAATGCGGCTCTAACAGCGTCCTTGGAGATGATGGCCAGAATGCTAAGTGATATGTCAACATATCAGGAAACGTCATACCAAGGGGAGTATTATTTCGATTTAGATGCTTTTATTGAGTCAAAGGCAGAAGAGGACCAGCCATTCTATAAAGCACTTTGTGAAACTCATGCATTTTCGAGCTTCCTTGAGGAAAGATTGCATCATCCTGAAAAAAGAGATTATTTTATTGCTATGATGGAAAAAGTTAAACCACAATCAAACAGACAAGGGCCGTTAAGAAAGCGTAGTTCGTCCGTCAATACAGCAGTTGCTTCATCCACATCTTCTGTTGAACAATCTAAAGACTCTCCTTCTTTGTCGACATTTTCACTGCCTCCTTTCACGTTTGAAGGAATCTTTAAAGGAAGTTTTTACGATGCTTGTTTGACAGAGCTTACCACGGTGATTGAGAGTTTAAATAACAAGTCTTCCCATCTGATGGGCAATTACCTTTACCTCAGAGGAATGTTTAAGGTTGCCTGTGGCAACAGAATTGACGGTCTAGATGATTTGTTTGCTCTTTCTACAAGGAATATGCAGCTTTATCCTAAAAATTTTATCGGTCAACTACTAACGCGACTCACTGAAGCAGAACAGACTGAGCTTCACACAAGAAGTTTCTACGGCGAGGCGAGTAGGATCAAAAACCAGAAAAAAGAGACTAACTACATTAATAGAAACAGAGTGAGAGTTACGACGTCCGCAGTTCCTTCCAGTCCTTTAGATCAAGCTGAATTCGTCAAACGCGTTACAATGTTGCAAATCACCGACGGCTCTGAAACAGCGAAGAAACTATATGAAGTTCTCAAGAACAAAACGAATGGACTCGTTGATCCAGACGTGTTTAGCAACTTCTACAGGTCTTTACAAGACACAGACCGCATAGCTCAATCCATCAAGCTCACAGGTATCACCGCAGAGTCGGGAGAGTCCATTGTGTTGGCGTCGTCATGGTTACGTACAGCAACAGCTACTGGTAGGCTTATTGCAACGACTAACAGACTAGTTTTCATGAATGACGGGACGCACAATTGTGAGACTGTGGTGCGATTCGAGGACATTCTAGACGTTGAGTATTATCAGTATTATGTCGTCATACCACCTGGTGTTGCGTCACTCAAGATTACCAGCAGATTCAAAACTGCAGTCCCGTTCATCGCGTGTTTAAAGGACGATCGAAGTTTTTGGTATGAATGCATCAGAGAAATGATCGCAGGATACAGAATATCACAAGAGTCTAAAGACCATCAGACTATCAAACAGGCCTCACAAAATGTCATCATAGCAGACGCTTTAAGACGAAGTGATCACGTGGATTCTATTGGAAATGTTCTTTGCCTTAAAAAGAACCAAGAAACTGAAATAAAAGCCAATAAACTCTCTGAAGAAACCAAAAAAATGTTGATAAGAAGAATCGATCCAACACCACAAGCCAACGAAACAGAAAAGACAACAATTGAAGCGATGGTCTTCGCGCCCGAAAGTAAAGAAGACGGTAATGAATCAGAGGTTTGGTGCGGTTTGGGATCTGGTGCTGTGGTTGTTATGGATACGATCTCTTGGAATATTGTGACTGTATTACGATATACACGTGGTAGAGTGAGTTGCCTTGAATCTGTTGGTAAAAACCACATTTGGATTGGTTCTATGGACGCCACTATCTACATTGTCAACAGGAAAACAAAGCAAGCTGACCAACAGCTACACAGTCATCATGATTTTATCTCCCACATTATCAAGACCGAAGAGGATGATGGCACTCTGACAGTATGGAGCGCTAGCCTTGAGGGACTAATCATTGGCTGGGATCCAGTCTCCCTAACACCCAAGAAAACGATAAAGTTGAATGGCGTAAAGACCATGACGTCCATCATTGCTATTGGAAACACATTCTGGTGTGTAACCAGGAATGCAGTACTTGTTGTAGATAGAGATTCCGATGGCAGTGAATACAAGACCTTGACAAGTACTACAGACCATGAGAGCGTTCGCTCTATTGACTGCATGTGCGCCATCACTGGCGATAATCAGGTGCAACAGGTGTGGACAGGATGTGACAAAAAGGGCATTATTGCATTATGGGATACTAACACGCATGACCACGTGGTTCGTGACATTCCATGTAAAGGTTTTACTCAAATGTTCTACATCGATGGCAAGGTATGGGGTGGTGGGCGAGATGGCACTATCTACATCATCAATGCTCAACACGTAACAATAGAACAG

Transcript

alvinactis_v1_g2783

Protein

Uniprot

Uniprot term	Description
A2RUS2	DENN domain-containing protein 3 OS=Homo sapiens OX=9606 GN=DENND3 PE=1 SV=2
A2RT67	DENN domain-containing protein 3 OS=Mus musculus OX=10090 GN=Dennd3 PE=1 SV=2
O95248	Myotubularin-related protein 5 OS=Homo sapiens OX=9606 GN=SBF1 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03455	dDENN	dDENN domain	Domain	Interproscan
PF03456	uDENN	uDENN domain	Domain	Interproscan
PF02141	DENN	DENN (AEX-3) domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005113	Domain	uDENN domain	Interproscan
IPR005112	Domain	dDENN domain	Interproscan
IPR037516	Domain	Tripartite DENN domain	Interproscan
IPR001194	Domain	cDENN domain	Interproscan
IPR043153	Homologous_superfamily	DENN domain, C-terminal lobe	Interproscan
IPR051696	Family	DENN Domain-Containing GEFs	Interproscan
IPR011047	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12296	DENN DOMAIN-CONTAINING PROTEIN 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0031410	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0032483	Biological Process	regulation of Rab protein signal transduction	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20162	DENND3; DENN domain-containing protein 3	-	Membrane trafficking	ko04131	deepkoala