Detailed information of alvinactis_v1_g27896 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_15:3375184...3379590
NR annotation: RUA04431.1, hypothetical protein DSY43_06255 [Gammaproteobacteria bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9DEY9RecQ-like DNA helicase BLM OS=Xenopus laevis OX=8355 GN=blm PE=2 SV=1
Q9VGI8RecQ-like DNA helicase Blm OS=Drosophila melanogaster OX=7227 GN=Blm PE=1 SV=1
P54132RecQ-like DNA helicase BLM OS=Homo sapiens OX=9606 GN=BLM PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09382RQCRQC domainDomainInterproscan
PF16124RecQ_Zn_bindRecQ zinc-bindingDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR018982DomainRQC domainInterproscan
IPR001763DomainRhodanese-like domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR032284DomainATP-dependent DNA helicase RecQ, zinc-binding domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR004589FamilyDNA helicase, ATP-dependent, RecQ typeInterproscan
IPR002464Conserved_siteDNA/RNA helicase, ATP-dependent, DEAH-box type, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13710DNA HELICASE RECQ FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006268Biological ProcessDNA unwinding involved in DNA replicationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0009378Molecular Functionfour-way junction helicase activityInterproscan
GO:0032508Biological ProcessDNA duplex unwindingInterproscan
GO:0043138Molecular Function3'-5' DNA helicase activityInterproscan
GO:0006260Biological ProcessDNA replicationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan

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