Gene detail

Detailed information of alvinactis_v1_g29054 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_15:19869617...19873605
NR annotation: XP_020897183.2, putative methyltransferase NSUN6 [Exaiptasia diaphana]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q7TS68	tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 OS=Mus musculus OX=10090 GN=Nsun6 PE=2 SV=2
Q8TEA1	tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 OS=Homo sapiens OX=9606 GN=NSUN6 PE=1 SV=1
Q84MA1	rRNA (cytosine-C(5))-methyltransferase NOP2C OS=Arabidopsis thaliana OX=3702 GN=NOP2C PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01472	PUA	PUA domain	Family	Interproscan
PF01189	Methyltr_RsmB-F	16S rRNA methyltransferase RsmB/F	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002478	Domain	PUA domain	Interproscan
IPR023267	Family	RNA (C5-cytosine) methyltransferase	Interproscan
IPR049560	Domain	SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core	Interproscan
IPR018314	Conserved_site	Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site	Interproscan
IPR036974	Homologous_superfamily	PUA domain superfamily	Interproscan
IPR029063	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR001678	Domain	SAM-dependent methyltransferase RsmB-F/NOP2-type domain	Interproscan
IPR015947	Homologous_superfamily	PUA-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22807	NOP2 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0001510	Biological Process	RNA methylation	Interproscan
GO:0008173	Molecular Function	RNA methyltransferase activity	Interproscan
GO:0008168	Molecular Function	methyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K21971	NSUN6; methyltransferase NSUN6	EC:2.1.1.-	Transfer RNA biogenesis	ko03016	deepkoala