Gene detail

Detailed information of alvinactis_v1_g29667 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_16:7245642...7251534
NR annotation: XP_020892738.1, uncharacterized protein LOC110231998 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g29667

ATGCCTGCAGTTCAAGCATTCAGAGTGTACTTCCAGTTTCATCTCCAAGACTTCAGCCAAACATCTCCGAGAAGTAACACAATGAGTATGAACTGTGAATACAGAGCAATGCTGCTCGTTGTTGCCCGTCAGATAGGCACGAAAGAACTCGAAGAACTAAAATTCCTATGTGTCGATATGATCCCTGAAAGTCGCCGAGAAGAAATTACAGAAACACTTCGACTTTTTCTCGAACTAGAGAAGCAAGCTCGGCTTGGAATCGATCAACTGGATTGGTTGGGTTACATGCTTGACAAAATCGGCAGGCAGGATCTTGTTCTGAAGTTAAGAGACTTTCAGTTCCAAAGAAACGCGTTTCTTGGGCATTTACGCAAAAGAACAATTACAGATTCTGCAACGCTGCAAGAAAATCATGCTACTGAAAATAGTGAATATTCAACGATACCGAATAATTATCCACCATCTTCTGAGTACAATCCATCAAACAACAGACAAGCTGGAGAGGTGACTGCACGATGCATCCTCAGAATTGCGTCCGTGGGGGCCTGGTTTGGAGGATGTGCTTATCTTCTAAATCAATACAAAGACGATCCAGAAGCCTTGATAAATGTAATAACTAGAGTGATATTACCATCGGGTATCGTAGTGCGACACATCGCCAGTGGATCTGTGAAACTGTTGCTATGGGCGACGGACCTGAGCGCCCTTAAAGAATTATGGAATAGGTACAAAACAGGTCAGCTACGCGAAGACCTGGAAAACCTACTGGTAACAGAAGACTTGAAGAACTTGGCAAATGGTGAAAAAATCGAATTTAGTGTTGAGATGAGTGAAGATGAATACAGGAACGCTTGCCTTGACTTGGTGATCGCGCATTATGAAGCTACAAGTTACCTCAACACCAGTCTCTCACGGACACTACATCGTTCCTGTTCTTTAACGGATATGACGTCACTCAACATACAGCCAATCATGGAAAACGCTCGAATCCAAGAGTTGCCACGTGACACAAAATACAAGATACCAATACAAAATAAACATCTCTTAAAGCTTCAATTAAGCGAATGTTCTTCGATGTCATCAGGACGCTTTAGTTCAAGTGTTTGCAGCGAATCATCTGAAAGTACTGGTGCGTATCCAGGCATTCCAATCATTaaaatatattgtgcgcgcgtctcttttggtgggtttcctgtggcagggagcgttggcatattatatattgggcttcctgtggcagagcgcgcggcatattgtatattgggcttcctgtggcagagcgtgcggcatattgtatattgggcttcttgtggcagggcgcgttggcatattatatatattgggcttcctgtggcagagtgtgcgacatattatatattgggttccctgtggcagagtgcgcggcatattatatattgggtttcctgtggcagagcgcgcggcatattatatattgggcttcctgtggcagagtgtgcgacatattatatattgggttccctgtggcagagtgcgcggcatattatatattgggtttcctgtgccagagtgcgcggcatattatgtattgggttccctgtggcagagcgcgcggcatattatatattgggttccctgtggcagagcgcgcgacatatcatatattgggttccctgtggTACTCGTAATTTGTGTTACTTTTTTGTAGATGATTCCCACTTTTTACTTTGTGATTTCCTCCAAACGAGCGACAAAGTTCAAGATATCTGTGCCCTTCTCGACCGAGATATGATATTGTGCGACGATTGGCGGAGCCTCGCTTCCGAGTTCGGTAACAAGATGATTAATATTCGTCTCTGGGAAAGAAAGCCTTCGCCTTCGTTGGCTTTGCTGGAAGACATTGTCTTCAAATCGCCATACACGAAAGTGACTGAGCTAATCGATAAATTGTCGGAATTAGACCGGGATGATGTCGTGGCACAAATACAAGGTCGTGAATACAATAGCGACCCCTTATCACTATGGAACCTACCATTCATGGTTAGAAAGAAAATTGCTGTAGAACTGGACAGTGCTACACAATCACAATTTACTGATGTGGTCCGTAATCTCGCAGATAATATAAGCCCCGGCGAAATAGAGTCCCTTAGAAAACGCCCCTCGCCAACCATGACCCTTCTAGAGGAACTAGAAACAGCGTTTCCCTCTTTACATGTATCACACCTCCGTGATGCGTGTCTTCAGGGTAAAGTTACCGACGCTGTAAAAACGCTAGAGCGATACACAAGAATGACTCAGTTAAAAAGGAAGAGAGTTTAA

Transcript

alvinactis_v1_g29667

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00531	Death	Death domain	Domain	Interproscan
PF01335	DED	Death effector domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051290	Family	CASP8 and FADD-like apoptosis regulator	Interproscan
IPR000488	Domain	Death domain	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR001875	Domain	Death effector domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48169	DED DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan