Detailed information of alvinactis_v1_g29785 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_16:9192057...9197207
NR annotation: KXJ21044.1, Chondroitin sulfate ABC exolyase [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P59807Chondroitin sulfate ABC endolyase OS=Proteus vulgaris OX=585 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09093Lyase_catalytLyase, catalyticRepeatInterproscan
PF02278Lyase_8Polysaccharide lyase family 8, super-sandwich domainFamilyInterproscan
PF09092Lyase_NLyase, N terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015177DomainLyase, catalyticInterproscan
IPR011071Homologous_superfamilyPolysaccharide lyase family 8-like, C-terminalInterproscan
IPR003159DomainPolysaccharide lyase family 8, central domainInterproscan
IPR039174FamilyChondroitin sulfate ABC lyaseInterproscan
IPR014718Homologous_superfamilyGlycoside hydrolase-type carbohydrate-bindingInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR011013Homologous_superfamilyGalactose mutarotase-like domain superfamilyInterproscan
IPR008929Homologous_superfamilyChondroitin AC/alginate lyaseInterproscan
IPR015176DomainLyase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37322-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0016829Molecular Functionlyase activityInterproscan
GO:0006027Biological Processglycosaminoglycan catabolic processInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K08961K08961; chondroitin-sulfate-ABC endolyase/exolyaseEC:4.2.2.20
EC:4.2.2.21
Enzymes with EC numbers-deepkoala

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