Gene detail

Detailed information of alvinactis_v1_g30580 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_17:194007...199428
NR annotation: XP_020892866.1, nuclear-interacting partner of ALK [Exaiptasia diaphana]
Species abbreviation AIDSS · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006132 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07967 all species →	zf-C3HC	C3HC zinc finger-like	Domain	Interproscan
PF08600 all species →	Rsm1	Rsm1-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052238 all species →	Family	SCF(NIPA) complex component	Interproscan
IPR012935 all species →	Domain	Zinc finger, C3HC-like	Interproscan
IPR013909 all species →	Domain	Nuclear-interacting partner of ALK/Rsm1-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15835 all species →	NUCLEAR-INTERACTING PARTNER OF ALK	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K11114	ACD, TPP1; adrenocortical dysplasia protein	-	DNA replication proteins	ko03032	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.