Detailed information of alvinactis_v1_g31031 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_17:6706535...6742596
NR annotation: XP_020897980.1, regulator of nonsense transcripts 2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2AT37Regulator of nonsense transcripts 2 OS=Mus musculus OX=10090 GN=Upf2 PE=1 SV=1
Q9HAU5Regulator of nonsense transcripts 2 OS=Homo sapiens OX=9606 GN=UPF2 PE=1 SV=1
F4IUX6Regulator of nonsense transcripts UPF2 OS=Arabidopsis thaliana OX=3702 GN=UPF2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04050Upf2Up-frameshift suppressor 2 RepeatInterproscan
PF000017tm_17 transmembrane receptor (rhodopsin family)FamilyInterproscan
PF02854MIF4GMIF4G domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007193DomainUp-frameshift suppressor 2, C-terminalInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR000276FamilyG protein-coupled receptor, rhodopsin-likeInterproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR003890DomainMIF4G-like, type 3Interproscan
IPR039762FamilyNonsense-mediated mRNA decay protein Nmd2/UPF2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12839NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005844Cellular Componentobsolete polysomeInterproscan
GO:0035145Cellular Componentexon-exon junction complexInterproscan

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