Gene detail

Detailed information of alvinactis_v1_g31250 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_17:10239432...10245109
NR annotation: XP_020907197.1, glucose-repressible alcohol dehydrogenase transcriptional effector [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q8W0Z9	Carbon catabolite repressor protein 4 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=CCR4-1 PE=2 SV=1
Q5RGT6	Protein angel homolog 2 OS=Danio rerio OX=7955 GN=angel2 PE=2 SV=1
Q9C2R2	CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=ccr4 PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR050410	Family	CCR4/nocturin mRNA turnover and transcription	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12121	CARBON CATABOLITE REPRESSOR PROTEIN 4	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0000175	Molecular Function	3'-5'-RNA exonuclease activity	Interproscan
GO:0000289	Biological Process	nuclear-transcribed mRNA poly(A) tail shortening	Interproscan
GO:0004535	Molecular Function	poly(A)-specific ribonuclease activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0030014	Cellular Component	CCR4-NOT complex	Interproscan