Gene detail

Detailed information of alvinactis_v1_g31419 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_17:13481269...13497052
NR annotation: XP_031552131.1, uncharacterized protein LOC116289374 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g31419

ATGGCATCGTCGCTAAGTGATGATGCCGCCATTCCATGGCCAGAAAAACTAACTGCAAAACAGCAACAACGCACGGACCAAGAAGACATACAGCTAGCATTTGGACTTGTCTCCATTGGCCCCGCAACGTTGAACTTCAGCAACAAAACTCAAACAGTGGATAACTATGAAATAGAGTGGCCACCATACAATGAATTACTGACTGCACATCCTCTGCGATCAGGCTTCTTTGTCGATGTAGAGGAGCTTGATAAAAATGCTACATTGAAGATTGGAATCTTCGTCCCACTCGACCACGTAGTCTGCCCTATGATTTGGAATCATGATGTTAATCCCAAACTGCTACGCGGGATGATTTGGTACTGGAACTTGAAAGACATTCGCAGACGGGCTATCTCCAAGATGACTTCCCCCAGTACCCTGCGACTCAATTATGGCAGTCCAAGTGAAGTCCACACGGGATCGTGTATTGGCGTGTACAAAGACTCTGACGGATCTCTTCACTTTGTGATCAATAACAAAGACCAAGGAGTCGCTGTTGAAAACATTCCGCGGAATTTCTTTTACGGTTGGATAAGAGTTGGATGCATTGGTAATATTAAGGTTACCTATCGTATGGACCTCTCATTAGGGAATTACTCTCAGCAATTTCTGGTGAAAGGAGTTCCTAAGACTCCTAAGAATGAAAGGAAGGCAAAAACAACTAAAGCCAACAAACAGAAGAAAGCTATTGCAGCAACAAAAAGAAAAACAGAAAAAAAAGCACAAACAATTGAGAAACCAAAAGTCTCATCTCAATCTACTCAGAAAGAAAGCAATCGGCAAGCCACTGCTTCCCCTAGGAATGCAGGTGGAAGGGCCGGGAAATCTGGACTAACTTTACGTTCATACCGCATGACCAAAACACCACGCGGACATTGCCTGATTATCAGTAACTCCAAGTTCCATGACCATGCACGTAATCGCGAAGGAGCAGATGTCGACGAAAAAGCAATAAAGGCACTTTTTGAAGAGCTTCATTTCATAGTAACTATCCAGAGAAACTTAAAAGCGAGAGAGATCGAGAACGAATTGTATGCTTTCGCAAGAAAAGACCATCAAGAATTTGATGCGTTTGTCTGTGTCATCATGTCGCACGGAGGTGGCGACAGCGTTATCCTTGGAGTAGATGAACGTGGAACAAAACTCGAAGATCTTATGTCTGAAGTCCAACCGACAAATTGCCCGTCGCTAAAGGGAAAACCAAAGATGTTCATTATACAAGCATGTCGGGGAGAGTTTCGCGAAAACGTAGCCAGCTCCTACTGCCCCCGCAGTTCATCACATGGTAGCAGAAACCATGCCATGTTTGATAGCTTTGATATCGATGGGCTTTCAACTCTTAGCATTGACTCGACTCTTCCTCGATCACTATGTCCTATCGAAGGGGACTTCCTTTTGGCTTATGCAACAGCACCTGGCTACGTGGCATTAAGGGATCGAAAGGAAGGGTCATTCTTTGTACAAGTACTGGTCGATGTCTTCAGAGAGTTTCACTGTGATTATCATGCTGTGGAGCTACTGACAGAAGTCAACAGACAAGTCGCTGAGCGAGTGGAAGCGCTCACCGACGGCACTTACTGGCAAATGCCTGCACCTTCTTTCACTCTTAGAGCCATAATTGAAAGTGAAGTGATCAACACAGGGTTCCCAATGCGTTTTATATACCGACTTCTTATAGGACTTGCAATGGTAGGAGTGATCTACTACGGTTATACAGTAATGAAGCGTAGGGAGCCTACCAATGGCGAAACTGTTACTGCAGTTAACGTTCGGAGGAATGCTCCAAGTACTGCAAATGATGCCACGCCCAAGACCATAACAACCGTGACTGGTAGTACACACACAACATTAGCGACCACACCTGGGTCAACCACACCTGCCAGAAAACTCCAGCCTACAAATGTCCCAATTTACGTTTGTGGCAATTCAACAGATTACATCGATATGAAATCCATCACTCCTGAGGGGAGGCCTAAGGGAATTATTCCGTTGCTTATCGTTTTTTTTACCGATGGTATTGGCGTCGATCCTAAAGTCTTAGAAGCTTTGAAGAAAGAACAGGAGGAGTTTAAGGACTTGGTGATTCTACCCACAAAGAATGGGTACTGGTTGACGCATCGGTATTTACATGCTTTGTTCTGGGGCTACAAACATTATGACTTCAAATATTACCTCAAAGCTGATGATGATTATTTTATCTGCTTGAATAACTTAATGAACGATCTTCAGTACCGCCACCACGAGAAACTCCTTTACTGGGGCCATTTTGGATGTGAGCGCAAAATGATTGCCATGGACGAGGGCTTTGTGATCATTTCTATAGATCTGGCCCAAGAAATTATAAAACGCAACAACTCACTTTGCTGTTCCCCCTTTGGAGGGCAAATGATTGCTATGTGGGTGAACTTGCTGGAACACGAGGGGTATGATGTCATCTATTTTCCAGACAATAGTCGATTGATGCATTACCGAAGTTATCTGAAGAAACCAAGTAACGATATGTGTAAGCGACTTCTAGGAATACATCAATCATATCCTAAATATATGAAACTGTATTGGAATATGACGAAAGATAGCTGGTATTCTCTTAAGAAGGAAGATTTTGAAAAGGTTGAGAGGAAAGAGTACAAGGATTATTGTAGTCTTCCTAAAGGGTGGGATTGGAGGGTGCTTATTCCATTCTATCGGAAACAACCAAAGCCTTGCTGGGAGCCTGGGCTGACTTGGCCTGAACTTGGAAAAATTAAAGCCATACGAAGTAGAGAAAACGATGAATGA

Transcript

alvinactis_v1_g31419

Protein

Uniprot

Uniprot term	Description
Q8MJC3	Caspase-3 OS=Oryctolagus cuniculus OX=9986 GN=CASP3 PE=2 SV=1
P42574	Caspase-3 OS=Homo sapiens OX=9606 GN=CASP3 PE=1 SV=2
Q5IS54	Caspase-3 OS=Pan troglodytes OX=9598 GN=CASP3 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00656	Peptidase_C14	Caspase domain	Domain	Interproscan
PF01762	Galactosyl_T	Galactosyltransferase	Family	Interproscan
PF07177	Neuralized	Neuralized	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011600	Domain	Peptidase C14, caspase domain	Interproscan
IPR015917	Domain	Peptidase C14A, caspase catalytic domain	Interproscan
IPR002659	Family	Glycosyl transferase, family 31	Interproscan
IPR006573	Domain	Neuralized homology repeat (NHR) domain	Interproscan
IPR002138	Domain	Peptidase C14, caspase non-catalytic subunit p10	Interproscan
IPR029030	Homologous_superfamily	Caspase-like domain superfamily	Interproscan
IPR001309	Domain	Peptidase C14, p20 domain	Interproscan
IPR043136	Homologous_superfamily	B30.2/SPRY domain superfamily	Interproscan
IPR033139	Active_site	Peptidase family C14A, cysteine active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47901	CASPASE RECRUITMENT DOMAIN-CONTAINING PROTEIN 18	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004197	Molecular Function	cysteine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0008234	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0006486	Biological Process	protein glycosylation	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016758	Molecular Function	hexosyltransferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05172	IL1RL2, IL1RRP2; interleukin 1 receptor-like 2	-	Cytokine receptors	ko04050	deepkoala