Gene detail

Detailed information of alvinactis_v1_g4850 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_2:32514194...32525415
NR annotation: XP_027043854.1, minichromosome maintenance domain-containing protein 2-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g4850

ATGAAAGAACTCAAGAAGCAATGCCAAGACCATTTGAGAGGCGCTCTCCAGGGAAAGCTGGTCTATCGATTTGTCTTGTCATTAAATCTGATAGAACTGATTGATTTTGATGCTCATCTAGGTAACCTTGCTCTTCATAACACTTTGCACCTTGTGGCTATGTTTCAAGAGGTGTGTTTCACAACTATTAGTACACTACAGTGGATTCCATCCATCACTTCTTCAGCTCAGATTCTTGTTGTTCTGAGGTTTTATTCAGTCCCACGTTTGCCAGAGTATTTTTCTAATGAAAGGAGAGGCTTAATGAACGGTACTCGTATTCATACTGGAACGTTTAGTATTGAAGGTGTTGTGTGTGCCATGACTGGAGTCACTCAATACACACAAAGTGCAAGATTCTATTGCCCTATCTCTTCATGTCCTGGATCATCACGTTGCTGTTATATTCGAGTTCATCTTGCTGGAAGAAACGAAGCTTTGACAACTGGGAAAACCTTTAGTTGTAAATACTGTAGAAGCACATTGCAGGAGGATGCTACTTGTCGTATTCTCTCAGAGAAGAGTGTCGTTCACGTAATAAGTCTACAAAGCCTGACTGCTAACACATGGATAAACAACCAACAGACTCGACACCAGGCCGTACCCATCTATCTTAGAGATGAATTGACTAAAGAGGTCCAGTTAGGCGGTCTGTACCGATTCGCATTGTGTCATTTCCTGGAAACTGCTGATGGTGATTCAACCAATGAAATATCATCAACTACGCCAGTATTTGAGGCAAACAGTATAGAAAAGATCAAGAGTTCATTGACCATAGAGAAAGGCATTTCCAGTCTTCCAAAGTGCATTCGGATCCTGTTGGAAGACAGAAAAGATTCCCCTTGGAGCTTTGCTGCAAGTTTGGCTTATTGCTATGGAGCGTCAATAGTCCATCCAAGTTCATTCCTCTATCTCAGAATGAGTCTCTTACTAAGCTTAGTCTTAGTCGGAACAAGCAACGATGCCATTGTCAATAAACTAGATATACTGGCGTTGGGTCAGGATTCGCTAACAATTCAAAGACTGCTGATGTACGGTGCTTCGTTTGCTCCAAGACTGATTGTATATTCTACAGTCTCTGATCTTTTTGCGACCGTTTCACGCGACCCATCGGGCACTGGGACATACATAGTTAATGCAGGGAGCTTGCTACTTGCAAACGATGGAATATGTCTGTTACCGAACATGATTACTGTGAAGAAAGAAAACAAAGAAAGGCTGAGAAGAGTTATGGAAACCAGAATGGAGGCGGTAGAAATCCCTAAAAAGTACACAGAATATGCTCAACACTTGACGGTACCTATGAAATCCTCAGTGTGGGCGTGTTACGAGGCACATGATTTTGCACCAAAAGTGAATGCTACAGAGTCTTGGGACGCAATAACACAAGTGGATTTTACACAGAATTTAGGAGCAACAACACAAGCACTTATGAATCGATTTGATTTAGTTGTTAGCGTGAATGACTGTAACAACAGTAAGAATGTCAGTCACACAAGTGAGTTGGCCTTGATGCGAGCCATGGATGACTATGACGAGAAACAACATATATTTATACCAGAGGAAGAGATCAACGAGTTTCTTCAGTTCGTTTTGCAAAGGCCCGTTTCCTTTGGGGAGTCGCCACAGAAACTTATCCAAAGCTTTTATCTAGCTGGTAGACGAGCAAGGAGCTTGCAAGGAGATTTTCCACTGTCCTCATTGCAAACAATAACGTCCTTGACAGCAGCCCATGCTAAATTGAGTCTGCGTGAGCAGGTAATTGACGAAGATGTAGTTGTTGCAGTGCAGATGTTTGACAACTCCCTTCGAATATCACACGGGTACTCCCTATTTGGTTTACAACAGGACTATTTAGACTCTGAGTCTATACTCTCAGTTAAGCATGACTTAAAGATGAGAGAGTTTCAGAAAATGCTCTACAGCTTCTGTTCAAATCACAAGTTCTATGGCTCATTTAATATTGATAGCACCCATGGCCATGAAGACTAA

Transcript

alvinactis_v1_g4850

Protein

Uniprot

Uniprot term	Description
Q4G0Z9	Minichromosome maintenance domain-containing protein 2 OS=Homo sapiens OX=9606 GN=MCMDC2 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00493	MCM	MCM P-loop domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR031327	Family	Mini-chromosome maintenance protein	Interproscan
IPR001208	Domain	MCM domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11630	DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000727	Biological Process	double-strand break repair via break-induced replication	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0017116	Molecular Function	single-stranded DNA helicase activity	Interproscan
GO:0032508	Biological Process	DNA duplex unwinding	Interproscan