Gene detail

Detailed information of alvinactis_v1_g5314 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_2:39148907...39187993
NR annotation: XP_031563446.1, cation-independent mannose-6-phosphate receptor-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g5314

ATGGCGGCTGAGGCCGTACAATTTCTTTTTCTACTTTCTTTTGCATATTTATCAACATTAACGACACAAGACGTTCTGCCTAAATCCACGCTGACTGTTGGTGGAAAGAAGTTTCAGTTAACGCGAAGAACATGGGAGTACAAAGCTAATGGCTACACATACAGTATAAATCTGTTTGACGCCGTAGAGAAGTGCAGCGGCGCCAAAGTTTGCAAAAGCTCTTCAAGGAACGTGAATCTGGGGAAGACTTTCAACTCTTCTTTGGCTGCCGACGACTCAGGGTTTGCGGTGGAGTTTGTCGATGGAGTCTGTGAAAGCAAGTCGGGAAACCCCACACTGACTACTCTGGTCCAGTTTAAATGTGGGAAATACATGGGCTCACCGGAGTTGATCGACGAATACACTACAAAAACAGCGTGTGTGAAGATTTTTGAGTTTGTTACGAATGAGGCTTGTAAAACAGCTCCCACAATACCCGAGGTGCCCTGTTATTTGTACAGTAATAGCAAGAAAATAGACTTGACTCCACTTATCAAGACTCAAGGGGGTCACGAAGTCGCCAGTGATGACAACTCCCATGATTTTTACATCAATGTCTGCCGAGATATAAAGCCAGAAAAGACAAATGGCAATACAGCTAAATGTCCAAGTGGTGCTGCTGGCTGTAGGACGGCCACGGACAAGAGTACCCCATTAGCGATTGGCAGCGTTAGTACACAATCAATACCAGTTTTGAATTCTAAATATAATGAAGTGGTCATCATGTACAATGGTACCAAGACGCTGTCTGAATGTCAGGGATATCCTTCTACAAAAATAACCTTTGTCTGTCCTCAGTATCTTCACCAAGTGAGTGGCAGAGGTCCAGTAATGACATCTGCTGACCACTGTACGTATGAAGTCCTCTGGGAAACAGAGTATGCTTGTCCACAGGAGCAACTGATGTCCAACAACAGCTGCATCTTGTCCAACGAGTTTGTTGACTTTGACTTGACCCCACTACAAAAGCCAGCAGGACATAACTACAGGGTACAAGACACAGACAAAAAGCATACCTACTACATGAATGTCTGCAAGTCTACCAATATACCTAACTGTAGTCCATCAGGGTACAATGCGTCTGTCTGTCAGGAAATCCCTGACTCCAACCAAGTAGTGTCACTGGGCGTGTTCTATGAGGAAAAACTAACCTTTGCGGATGGACAACTGGTGCTAAGCTACAAAGGAGGAAAGGCATGCCACACTGTTGCTTGTGCGTTGGGTGTCAATCGTGGTGAAAACTGTAAAGTTCAAGACACAGTAGCAGGATATGTATTTGACTTTAATACCATGGCAACGCAACATATATTGGGCAAGTCGTATTCATTAGTTTCTTTGAGGAAATTCAAGTATTATCTGAGGATTTGCAAGGACGTCAATGATTCCTCTATTCCATGTGTCAACGCCAGTGCCTGCCAGGAAGATTCCAGCAAACCACACAGCGTACATGTAATTGGCAAGCCTAATACCATGCTGTACTACTATGATGGCATACTCAAACTATCCTACAGCGGTGGAGACAAGTGTCACAATGGAGTAGAGCGCCAAACCCATATCTCCTTCATCTGTAAACCTAATGCAACCTTTCAAGGTTATGGGGTTCCTGAGTGGGACCGTGAAGACCATTGTATCTATCATTTTAGATGGCCTACCAAGTATGCCTGTCCAGCTCAGGTTATAGAGTGTGCTGCAAGATCTAACAACAACCAGTATGACTTATCAAGCCTAGTAAAGACTGACGATAACTGGCAATCAACCAGTGCAGTAGGGACCTTCTACATCAATGTCTGTCGATCACTGAATCTCAAACCAGAGGTTCGCCAGTGTTTTGGCACCTCTGCAGTATGTCTAAAGGAACCTAATGGggatttccataacttggGTCGGGTAGACAGCTCGTTAAAGGTCACTGCCGAGGGAACCATTACTATTACGTATACTAAAGGAGACACGTGCAAGCAAGATACAACACAATTCTATCAGTCTGAAATACTGTTTATATGCAAGAAAGGTGCAACGGGTACCGCTCCAGTTTATCAGACCAAAGACAAATGTACTTATAAGTTCCGGTGGGAAACCGCTGCAGCATGTGCTATAACCAACGTTGTTGGCTCCAACTGTTCAGTCCAGGACCCCAAGTCTGATACAGTCTTCAACCTCTATCCCTTCGTCGTCCATACGACAATCCCTACAGCTTTACGATGCCTAACGGCAGGGTCTTTAAAAGATGGTGATCGTGATGTAGTCAATGGATTCCCAAGAATCTCAAAGATCAGATTTTACTGCGATCCTACCATTCCTCTCGGATCACCCAAGTATATTGAACAAGCTAGTGAGAAAGACGGGGAGGTGTTTTATTTTGATTTTAAGACCTCCTTGGCTTGTTCTGCTAAGCAAGTCCAGTGTGCAATAACAGCAACAAATATGGTGGACAAATATGACTTGACGCCAATGGGATTGGTCACGGGTAACTGGGAGGCCGTTGATGCTCGTTCAAAGTACAAACACATTCACTACTTCATCAATGTGTGCAGACCCATCAATCCTCTTCCCTCTAGTTCCCCCATCAAATGTCCAGGTGGAGCCATTGGTGGCTGCCAAATTGACCATAGCACTTCCGTAGGTCATAATCTAGGCTACATACAAAGTAGTCCAATCATAGTTAGCAAAGGTGTATTGACGCTGCGGTATTTTGGTGGTGATTTATGTCACGGCAAATATCACAGAAGTACAAGGATTAACCTCGCTTGCTCTAATTTTACGGGATCTCCCATATTTGAGACTGAAACCCCAGACTGTGAATACGTCTTTAATTGGCAAACACCTAGTGCATGTCCATTGACCAGGGAATCTGGCACAAACTGTGCTGTGACAGACAGACAATATGGATATACCTTTGACATGTCATCACTTAATGTCAAAAATAAATATTACAATGCCAGTGTACCCGGTGGTGTGGTTTATTTTGGAGTATGCTCCAAGACAAGCAAATGTCCGGGTAGTAATACTGCAGCCTGTTTTACTGCAACTAGTGCTAAAGATCCTAAAGTCCTCGGTGTGGAATCAACCGAGATCAACTACTTTGACCAGGAAGTTTCTCTCCGGTATAAATACGCAAAGTGTTCGCTTTTAATAACATTTGAATGTGACCGAACTCAGCATGGAGAGGGAATGGGACCCAAGTTCGAAAGCCTCCAAAATACTTGTAACTACAACCTACGCTGGCTTACTAGCCTCGCTTGTCGACCTAACATAAACGTCCAGTGTAGCATCAGACGAGAGAGCAGTGATAAGAAAACAGACCTACAGTATGATTTCACGCCGTTATCAAAGCCTACAGACAACTGGAGAGCCCTTCCAAAAAGCTCGTCCCAGACCTCTTTCTGGATAAATGTGTGTCGGCCAATTGTGCAAACTGGTGAGGCAACTAAGTGTCCCGCCACTGCTGGTGTGTGTAAAGTGGATGTCAAGTCAGGACAGAAAAGTTACATGAGTCTTGGGTCATTAACAAGTGGTCCAGTGGTTGAGAAGAACAGCATATACTTGAAGTATACTGGTGGATATAAATGTTCTAATGGTAAACGAGCATCTGCCAAGATACGTATGGAGTGTGGAGTATACGCAGAGGCTGCTCCTATAGAACTCAATGAATATAAAGACACTTGTACATATGAGTTCCTATGGGTTACCAAGTACGCATGCGCAATAAACACTGCCGCTAATGTGAATGTCAGTAACGACTGTACAGCGGTCAATCCTGTGACCAATTACAAGTTTGATCTCAACAAGCTGTCTAGAACTACAGACTACAATGTTAATGATATTAGTGGGCATTACTACTTGCTGAATATATGCAAGCAGCTGAGTGCTTCTAAAGCGAAACCTTGTGGTACTAATTCAGGATCGTGTCAGTTATCCAAGGGAAGCTCTTCCCTTCACTTCAACGCTGGAAACTTCAACAAGCAGCTCGCATACGTAGATGGTGTCTTGAGATTGATTTACACGGGAGGCACAGTTTGTCATCATTCAAACACACCTCGGACAACGATCATATCGTTTGTTTGTAGCTCTACAACTAGTGACAATCTTGGCCATCCTGTCTTTGTTGCCGAGTCGAACGATTGTACGTACTACATTACCTGGCACACGAAACTGGCTTGCGAAAGAAAGGTTGAGTGTTCACCTATTGTATATGGCACATCAACCAATATTAAATACAGCCTACGTAAGCTGgctaatgatgatcacaactggctgGTAATTCCTACTGATGGTAACGACCAGGGTTCTACGTACTACATCAATATATGTAAGGCTTTGGTGCCAATGAAGGGAATCAATTGTCCTGCGGGAGCGTCGGCTTGTTTAAAAGATAAAAGTAGCGTCGCCCAGAGTCTTGGACGAGCACGAGATCCACCTAAGTTAGAAGATAATAAAATAGTGATCAACTATTACAATGGCACGAACCAGGCTCAGACAAAAATAGAACTGACATGCAATCGTGGTAGTCTGGGTAAACCAATGTTTGTGTCTAAAGATAACAATGTTTACGTGTTTACATGGGCTACATCTGCAGCATGCCCTGAGTACGACACGCCTGATCTCAAACGGTGTCGAGTTTACGACCACAATACCGAGTTCTATTACGACGTCAGCCCTTTTAAACATGTTGGTAACGGCTATATTACGCTAAACACTGTTGACGGCTCTACGCTATATGCAAGCGTTTGCAATAGTTTACCAATGACTGGCTGTGCTGGAGCAGGCGTGTGTTTGGTACCTTCTAAGGGAAGTCCACAGGTGCTTGGGAAGTTTAAATACATGTCTATGGCCTACTTGAACGACGAGAATATGCTAGTGATGAAGTACTGTGATAAAAAATGTAGCAACACAGATGTCAAAGTCGTCTCAAGAATTATGTTCATCTGCGACGAAAACACTTCCAACTTTGACAAGTACTCATTGGACAGTATTGAATCAACTGGTGCTAATATCATATGGAAAACCAACCTAGTGTGCCCACCAGTACAGCAGCAGTGCGTATTGAACGACAATGGTAAACTGTACGACCTACAACTCTTGTCCAGTAGAACAAAGAGCTGGCATTATACCTCGGTTAAAGGAGATAAGTACTGGTTCAACATCTGTCGAGGTATCAACGACCAACCAGGCTGCCCTCGTTATGCTACAGTTTGCGCTCAGATTGGTAAAGACAAGAAAATACTTGTTCTGGGGTACGGCaagacacaagtgatcgacagaagtaCTCCAACAGATAAGCAGATTTTGGTCCATTACACTGGACAAACAAATGTACCAATATGTACACACAAAGACAGACCTGCACGGGTGTTGTTCCAGTTGATATGTGGACAGCATGTTGGAAAGCCAAAGCTCTATCATGTGGACGATTTAAGCTGTACCTTCACATTCAGGTGgacaaccgttgcagcatgtgagatagagagTCTAAAGGCATTAACGATGTCCAACTGTCGTGTCAGTCACCCTAAGACCAAGCGAACCATCGACTTCAACAAGATTGATAATGGACCCATTACCGTGACAGGAAATGGAAATCAGTTCAGGTTTCGTATCTGCGGCAAGCTACCAAGTTCAGTTGGTGGTGGCTGTGCTAATAAATGGTTGTGTAAGGGTGAGAAAGGTTACGATGTCACTGCACCCAAACTATACTATGAAGACTATGCCTTTGAACTGTGGTTCGTGACCAAGTCATCTTGTCCCAGAGCGAGTGGCAAATTTGAGACGTTCATAATCAACTTCCAGTGCTCTGATACTGTTGCCATCGGCAAACCGATCTTCGAGTACGAGTCGACCAGCTGTCATTACGTGTTTACATGGTCTACTGCTTTAGTCTGCACCAAGGATCAAAGTGGTGATGTCATCGACAGAGCTAGTGCTTCCAAGACCGGTTCATCTGCCGGTAAAAAGGCTGGTATCGCTTTTGCTGTCATATTAGTTCTTCTAGGTGTTGCAGCTTTAGTGTTTGTGCTACACAATCAACGAAGAAGGCAAGCATTGGTTCTGTTTGTACGAGCCAACGTTAGGAAAGTTCGACGTAACGGGGACTCGTCGTCCAATGCGGTCTACAAATACCAAAAG

Transcript

alvinactis_v1_g5314

Protein

alvinactis_v1_g5314

MAAEAVQFLFLLSFAYLSTLTTQDVLPKSTLTVGGKKFQLTRRTWEYKANGYTYSINLFDAVEKCSGAKVCKSSSRNVNLGKTFNSSLAADDSGFAVEFVDGVCESKSGNPTLTTLVQFKCGKYMGSPELIDEYTTKTACVKIFEFVTNEACKTAPTIPEVPCYLYSNSKKIDLTPLIKTQGGHEVASDDNSHDFYINVCRDIKPEKTNGNTAKCPSGAAGCRTATDKSTPLAIGSVSTQSIPVLNSKYNEVVIMYNGTKTLSECQGYPSTKITFVCPQYLHQVSGRGPVMTSADHCTYEVLWETEYACPQEQLMSNNSCILSNEFVDFDLTPLQKPAGHNYRVQDTDKKHTYYMNVCKSTNIPNCSPSGYNASVCQEIPDSNQVVSLGVFYEEKLTFADGQLVLSYKGGKACHTVACALGVNRGENCKVQDTVAGYVFDFNTMATQHILGKSYSLVSLRKFKYYLRICKDVNDSSIPCVNASACQEDSSKPHSVHVIGKPNTMLYYYDGILKLSYSGGDKCHNGVERQTHISFICKPNATFQGYGVPEWDREDHCIYHFRWPTKYACPAQVIECAARSNNNQYDLSSLVKTDDNWQSTSAVGTFYINVCRSLNLKPEVRQCFGTSAVCLKEPNGDFHNLGRVDSSLKVTAEGTITITYTKGDTCKQDTTQFYQSEILFICKKGATGTAPVYQTKDKCTYKFRWETAAACAITNVVGSNCSVQDPKSDTVFNLYPFVVHTTIPTALRCLTAGSLKDGDRDVVNGFPRISKIRFYCDPTIPLGSPKYIEQASEKDGEVFYFDFKTSLACSAKQVQCAITATNMVDKYDLTPMGLVTGNWEAVDARSKYKHIHYFINVCRPINPLPSSSPIKCPGGAIGGCQIDHSTSVGHNLGYIQSSPIIVSKGVLTLRYFGGDLCHGKYHRSTRINLACSNFTGSPIFETETPDCEYVFNWQTPSACPLTRESGTNCAVTDRQYGYTFDMSSLNVKNKYYNASVPGGVVYFGVCSKTSKCPGSNTAACFTATSAKDPKVLGVESTEINYFDQEVSLRYKYAKCSLLITFECDRTQHGEGMGPKFESLQNTCNYNLRWLTSLACRPNINVQCSIRRESSDKKTDLQYDFTPLSKPTDNWRALPKSSSQTSFWINVCRPIVQTGEATKCPATAGVCKVDVKSGQKSYMSLGSLTSGPVVEKNSIYLKYTGGYKCSNGKRASAKIRMECGVYAEAAPIELNEYKDTCTYEFLWVTKYACAINTAANVNVSNDCTAVNPVTNYKFDLNKLSRTTDYNVNDISGHYYLLNICKQLSASKAKPCGTNSGSCQLSKGSSSLHFNAGNFNKQLAYVDGVLRLIYTGGTVCHHSNTPRTTIISFVCSSTTSDNLGHPVFVAESNDCTYYITWHTKLACERKVECSPIVYGTSTNIKYSLRKLANDDHNWLVIPTDGNDQGSTYYINICKALVPMKGINCPAGASACLKDKSSVAQSLGRARDPPKLEDNKIVINYYNGTNQAQTKIELTCNRGSLGKPMFVSKDNNVYVFTWATSAACPEYDTPDLKRCRVYDHNTEFYYDVSPFKHVGNGYITLNTVDGSTLYASVCNSLPMTGCAGAGVCLVPSKGSPQVLGKFKYMSMAYLNDENMLVMKYCDKKCSNTDVKVVSRIMFICDENTSNFDKYSLDSIESTGANIIWKTNLVCPPVQQQCVLNDNGKLYDLQLLSSRTKSWHYTSVKGDKYWFNICRGINDQPGCPRYATVCAQIGKDKKILVLGYGKTQVIDRSTPTDKQILVHYTGQTNVPICTHKDRPARVLFQLICGQHVGKPKLYHVDDLSCTFTFRWTTVAACEIESLKALTMSNCRVSHPKTKRTIDFNKIDNGPITVTGNGNQFRFRICGKLPSSVGGGCANKWLCKGEKGYDVTAPKLYYEDYAFELWFVTKSSCPRASGKFETFIINFQCSDTVAIGKPIFEYESTSCHYVFTWSTALVCTKDQSGDVIDRASASKTGSSAGKKAGIAFAVILVLLGVAALVFVLHNQRRRQALVLFVRANVRKVRRNGDSSSNAVYKYQK

Uniprot

Uniprot term	Description
P08169	Cation-independent mannose-6-phosphate receptor OS=Bos taurus OX=9913 GN=IGF2R PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00878	CIMR	Cation-independent mannose-6-phosphate receptor repeat	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044865	Domain	MRH domain	Interproscan
IPR009011	Homologous_superfamily	Mannose-6-phosphate receptor binding domain superfamily	Interproscan
IPR000479	Repeat	Cation-independent mannose-6-phosphate receptor repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15071	MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005537	Molecular Function	D-mannose binding	Interproscan
GO:0007041	Biological Process	lysosomal transport	Interproscan
GO:0038023	Molecular Function	signaling receptor activity	Interproscan
GO:0005520	Molecular Function	insulin-like growth factor binding	Interproscan
GO:0005770	Cellular Component	late endosome	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06564	IGF2R, CD222; insulin-like growth factor 2 receptor	-	Lectins	ko04091	deepkoala