Gene detail

Detailed information of alvinactis_v1_g656 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_1:11123791...11131353
NR annotation: XP_005761534.1, hypothetical protein EMIHUDRAFT_216970 [Emiliania huxleyi CCMP1516]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g656

ATGAATGAGCAAGGAAATGGACCTGTGAGGGATAGAATCCCAAAGTATGGGAAGATTAATTATAAGGTGGAAGAAAAACGTGGCGTTCATTCTGTAAACAATGAAGATAATCAGCTGAAAGAATGGATACGTGCCCGGCGTATAGGGTTTATGTCCTTTACCATTCCGGTTTCCATAATTCTGGTGCTGGCTACGGAAACATTTGGAGGATCGGCGTATTCCGCCATTCACTCAACTTGGGGATGGGAACCAATAGAGAAGACCATTCTATATTTCAGCTTGTGGGCTTCAAAAGAGGTTTTTCTAAATATATTTAAATATTGGTTGATGGTTCATGCATTTGGGATAAGCAAAGCTCACTACAACTTAGTTATTGGACCTCGTTCTGAATGGACTGGAAAAGAAGTAGACATGTTATGTAATACGTATGGGCGAAAAACAATAAAGATCATGGATGCTATCAACCGACGCATGGGTCACACGGTTATCAATATCTTTCGGATTGTATTTTACGTTTATGTTTGTGAAACTAACGAAATACGCCTTAAAACAGCCATGCTACAACTCCCGGTCATCAGCACGCTCAAGATTATTACAGAATCTGGAAAACACTTTTTTGACATTGGACGTTACATCTTTCAAGGATCCCGTGTTTTTGATGGACGATATGGTCGGTTTAATCTAGTAGTGGTTAATTTTTGGGCCTATGCAGGAAGGATCATTATGTTTCAATTACTGGTACGCTCAAATCAAAGTGATGAGGCAAAAGGAATACTTTTTGCCATTTCTATGATGCCACTTCTATGGGGAGACTCTTTTGGCGAGATTATCGGATCCTTCTTTGGAAAACTAACATTCCAAGTACGAGGCCTGGGTGATGTCAATACCAAAACCGTCGAGGGAACATTTGCTGTATTTGCATCATCTTTTATTGCACAACTTGTCATGTACTATTATATTTTCGGTCTCAGCAATTTCAGCAATTTCTTCATCTTTCACCCTGTAATAGTATTCCTCTACACTTGTGTTATTGCAGCATTTGTTGAAAGTGCTGCACCAAGAAGTACCGACAACTTCTTCCTGCAAGTGTTTAGCCTGGTTGTGCTCATGgtgattttaattccatctctaaagacgaagtcaaggagtaggagcagcaggagcagcagcagtacaggagcaggagtaggagcagcagcaggagcatcagcaggagcagtacaggagcaggagtataggagcaggagcacaggagcagcaggagcagcaggaacagcaggagcagcaggagcagcaggagcagcaggagcagcaggagcagcaggagcagcaggagcagcaggagcagcactagaagcactagaagcagcagcactagaagcagcagcactagcagcagcagcaggagcagcactaggagcaggagcaggagcaggagcaggagcaggagcaggagcaggagcaggagcaggagcaggagcaggagcaggagcaggagcaggagcaGAAGTCTCATTCGCTACTGGTTCTGTACTTCATTTCAAAGGTGTTGGTGAACAAACTTCAAGAGAGGACCTAAAGGAATTGTTTAGTGCTCATGAGGAAATTACATTTATAGACTTTGCGAGAGCTAAAACCGAGGGCTATGTACGATTTGCAAATGAAGGAGCAGCTCAGCGTTCCATTGATGCAATCAAGGCAGCCAATGATGACAAGATTTGTGTAAGAAATGATGATAGAGGTGAGGAAGAAACAAACTATTTTGAGAAAGTCAAAGCAGGAAAGCTTCAAAAGCGACAGAAAAAAGaaaagaaaaaagaagaaaaaattgagaaaggcaaggcaagaaagattgaaaagcgaaagaataaaGCCGAGGCAAAACGTTTAAAACGAGGTCTCAAAGGGCAAAGTAAACAGGGACAAGATCAAGGGAGCAACTCAGAAAAAGACAAAAACACCAAGTTTTGCCTGCTGCTTTGA

Transcript

alvinactis_v1_g656

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08777	RRM_3	RNA binding motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014886	Domain	La protein, xRRM domain	Interproscan
IPR037997	Family	CTP-dependent diacylglycerol kinase 1-like	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31303	CTP-DEPENDENT DIACYLGLYCEROL KINASE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004143	Molecular Function	ATP-dependent diacylglycerol kinase activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan