Gene detail

Detailed information of alvinactis_v1_g6639 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_3:19222042...19244266
NR annotation: XP_028517319.1, leucine-zipper-like transcriptional regulator 1, partial [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g6639

ATGCAGGCTGCGAGTTGTGGAGCACGTCCAAAGCCAAAGAGCAGCAATGACCGTCCACCTCTGGAGGTCGAAGGATCCATAGATTTGATAGATACTTTGACATTAGACTTTGGTCCTTTTGAGACTGTGCATCAATGGAAGAAGCTGCCGGACTGTGATGAGTTCGTGGGGGCAAGGAGAAGCAAGCATACCCTGGTAGCTTGGAACAATGCATTGTATGTGTTTGGGGGAGATAATGGGAAGAGGATGCTGAATGACATGTTGAGATTTGATATCAAGGAAGGTTCCTGGAGTAGGGCGATAACCAAAGGCAGTCTGCCAGCACCTAGATACCATCATTCAGCTGTTATATTTGAGCAGTCAATGCTTGTATTTGGTGGATTTACTGGTGACCTGTACTCCAACACCAACTTACAAAACAAGAATGATCTCTTTGAATACAGATTCAAtacaggacagtgggttgaatggactgtagaaggaagATTGCCTCCAGCAAGATCTGCACATGGCACTGCCATATATAAGAACAGACTTTGGATTTTTGCAGGATATGACGGCAACAAAAGGTTAAACGATATGTGGACCATAAAACTAACGGATGCAAACCCTTATTGGCAAGAGGTTCAGCAAGCAGGCGACTGTCCGCCGACACGTTGCGATTTCCCAGTGGTCATCGCCAAGGATAGTATGTTTGTGTTTTCTGGTCAAAGTGGAGCGAAGATAACTAACAACATGTTTCAGTTTAGTTTTCTAGACAAAAGGTGGATTCTAATCCCATCAGCACATTTACTTCGTGGTTCGTCTCCTCCACCTCAGCGTCGCTATGGTCACAGCATGGTTGCATTTGACCGTCACTTGTATGTGTTTGGAGGTGCTGCAGAAAACATTTTATCCAGCGACTTGTATAGGTTCGACATTGATCAACATAGCTGGGATGTTATCCAGCCAACCACTGACAGCCAGCTTCCAACAGGGAGGTTGTTCCATGCCGCTGTCCAGATAGATGGCACTATGTATGTCTTTGGTGGCACTGCTGATAATAATGTACGGAGTGGAGAACTTTTTAGATTTGAGCTTGCTTGCTATCCAAGATGTACCTTGAGAGATGACTTTGAACATCTTCTTGACAGTAAACAGTTCTGTGATGTTGTGTTTGTGGTTGGGCAACCAGAGAGTAAACGATTCCCTGCACATGCATGCTTGGTTGCTGCTAGATCTCCATGGTTACGAAAGCAACTGTTGCTAAAAAAGAGCAATGATATCCAGGTAGTCGATAATTCAAATAGTGAGAATGACCAGGTGGCCTTACCTGAAGTGCAAATAGAGGAAGCCAACCCTGAAGTGTTTAATATTGCTTTATGCTACATGTATACTGACTGTATCTATCCACTTGTCAAAGATTGCCAAGGGTCTCTAGTGATCAGCTTAATGATGGATCTTTATCGCCTTGCATTGAAGCTTGGAATTGGTTCCTTGGAGGAACTCTGTGTGCAGTACATAGAGTCATCGATTTGCCAGGAAAACGTGCTCATTGCTCTTGAAAATGCTGCAAGACTTCAGCTTGATTGTCTCAAGGAGTTTTGTCTTCGTTTCATTATTCGGGAATCAAACTACACAAACATTATAATGAGTACGGAATTTGAAACAATAATGCAGGCTTTAATGGTGGAAATAATACGCAGAAGACAACAGACTGCATTAGAAACTCCAGTGTTTGACAACAGAGTTCCTCTATATCCTGTGAAGAGCCTTAACCAGGCCATGCAGGAATTCCTCACTAGTCCTTGGACGGCAGATTTCCACGACATAACCCTTGTCGTTGATGGTAGTTCCATTGGTGCCCATAAGGCTATTCTTGCTGCAAGGTGCAGTTACTTTGAAGCAATGTTTCGTTCCTTTATGCCTGAGAACAACATTGTCACGATAACAATTGGAGATACAATTCCATCCAAGAAGGCCTTTGATTCATTACTACAATACATCTACTATGGTGATATCACTATGCCGCCCGAGGATTCACTATATCTTCTTTCTGCTCCATTTTTCTTTGGATTTACAAACAACAGACTCCAGGCATTTTGCAAAGAAAACCTTGAGAAGAATGTGTCCTTGCACAATGTAGTGGATATCCTGGAGGCAGCGCATCAAATTGGAGCTGTTGACATGAAGAAACATTCATTGGATATCATCGTACAGCGTTTCCCCAAGATTGCCAGGTCGCCCAAACTACGCAGTCTAAGCAGACAATTACTGCTAGAGATATTGGATGCTATTGCAGATTACATGAAGATAGCCAACCATGACATGTTGTCAAGACAAAGtacagttgaacctccactatcagacacctctcctaagcagacagacacctgctgcaagcagacacctcctgcaaatggacacctgaaagtggacacctcctgcaagtggacagctcctgcaagtggacacctgcaagtggacacctcctgcaagtggacagctcctgcaagtggacagctcctgcaagtggacagctcctgcaagtggacagctcctgcaagtggacatctccagcaagtggacacctcctgcaagcggacacctgcaagtggacacctccagcaagtggacagctcctgcaagtggaaacctccagcaagtggacacctcctgcaagcggacacctgcaagtggacacctcctgcaagtggacacctcctgcaagtggacaccggcaagtggaaacctcctgcaagtggacactggcaagtggacacctcctgcaagcggacacctgcaagtggacacctcctgcaagtggacacctcctgcaagtggacacctcctgcaagtggacacctcctgcaagtggacacctcctgcaagtggacacctcctgcaagtggacacctcctgcaagtggacacctcACACTTTAGGTGA

Transcript

alvinactis_v1_g6639

Protein

Uniprot

Gene family

Uniprot term	Description
Q5R4Q7	Leucine-zipper-like transcriptional regulator 1 OS=Pongo abelii OX=9601 GN=LZTR1 PE=2 SV=1
Q8N653	Leucine-zipper-like transcriptional regulator 1 OS=Homo sapiens OX=9606 GN=LZTR1 PE=1 SV=2
Q9CQ33	Leucine-zipper-like transcriptional regulator 1 OS=Mus musculus OX=10090 GN=Lztr1 PE=1 SV=2

Gene family	Subfamily
Transcription Factors Family	ZBTB
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|BTB

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13415	Kelch_3	Galactose oxidase, central domain	Repeat	Interproscan
PF13418	Kelch_4	Galactose oxidase, central domain	Repeat	Interproscan
PF00651	BTB	BTB/POZ domain	Domain	Interproscan
PF13964	Kelch_6	Kelch motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011333	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR006652	Repeat	Kelch repeat type 1	Interproscan
IPR000210	Domain	BTB/POZ domain	Interproscan
IPR051568	Family	LZTR1/Attractin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46376	LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005794	Cellular Component	Golgi apparatus	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23330	LZTR1; leucine-zipper-like transcriptional regulator 1	-	Ubiquitin system	ko04121	deepkoala