Gene detail

Detailed information of alvinactis_v1_g6773 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_3:20984173...20989830
NR annotation: XP_020899746.1, leucine-rich repeat-containing protein 74B-like [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A0JPI9	Leucine-rich repeat-containing protein 74A OS=Rattus norvegicus OX=10116 GN=Lrrc74a PE=2 SV=1
Q0VAA2	Leucine-rich repeat-containing protein 74A OS=Homo sapiens OX=9606 GN=LRRC74A PE=1 SV=2
Q6ZQY2	Leucine-rich repeat-containing protein 74B OS=Homo sapiens OX=9606 GN=LRRC74B PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13516	LRR_6	Leucine Rich repeat	Repeat	Interproscan
PF13499	EF-hand_7	EF-hand domain pair	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611	Repeat	Leucine-rich repeat	Interproscan
IPR002048	Domain	EF-hand domain	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR052394	Family	Leucine-rich repeat-containing protein	Interproscan
IPR032675	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR011992	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24114	LEUCINE RICH REPEAT FAMILY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14319	RANGAP1; Ran GTPase-activating protein 1	-	Messenger RNA biogenesis	ko03019	deepkoala