Gene detail

Detailed information of alvinactis_v1_g8076 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_4:4555416...4564427
NR annotation: CAH3181362.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g8076

atgaaaagcgtggttggtcgcagtaactgggcagagtttgctataaggaatacaagggatagTCAATATCCACTAAAAGAACTTAATACTACTCGTATAAGTAACAATCAAATTGAACTTCGACCCGAACAAGTAGAAGCTGTTACTGGATTATTAAATGATCGTGATGTCCTTGCCGTACTTCCTACGGGTTTCGGCAAAAGCCTCATATTTCAGCTGTTTGTGAAGGCGAAGAATACATCAGATTCGACTCAAACTACTTCAGTGTTAGTTATTTGCCCTCTTGCAAGTCTCATTAGAGATCAGGTGAAAGAAGCGAAGGCCTTCAGCCTGGACGCTATTTCGATAGAAGATCTTCATAAAGAAAACAGTGATTGTCATTATAATTTGATATTTGGATCGGCCGAACGGAATCCAAAGAAGGAGAAGAGCTTTCGAGCTGCATTTGGTGATCTATCAATTCTGAGGTCTTTGTGCAAGGAAGTTCTCGACGCACCAATCCATACAAATCCGCCGGAAACTGCAGACACGCGACCGGGATTTGTTCATTTTACAACTTCAACACCAGTACGCCGTCAGCAATTTACAACTACAAGTGATTCATCCACAAAGAAAGCTACCCGTGTTGTCATAAATGTCCACTATCCTTCAAAAAAGGTGAAAAAGGAACTAATTGGTCAATGGGAAGTTGTAGGGAAAGCATTGGTAAGTGATAAGCCGGCACAAGCCTTAGCAAGGGCTGTGTTCAAATCAAAAGAAATCGGTAAATGTGTAATCGAAGGAGCGTTAAAGATTCTAAATGAAGAGTTGAAAGGCCTGTGCTCTAGGAAAAGGCCATCATTTCTCCTGAAAACAACAAAGCAAGACCTCCTCAGCTTCAAACTGGAAAGTCTCTGTAAGGAATGGGAACAACGTGCACCTGTTTTTTATGCTTTTCTCATTACTGCCTGTGTATGCAATTCTTGCGAGTGGACACCAGCCATGGCCATGGCGGGATCTGTCATATTGAAACAACGAAACAAACACATGAATGCCTTAGCTACTGTTCTTGGAATAATGATAAAATCTAGGTCGATGGAGGCTACACTTGAGAATCTTTGCAAACTTAAAGTGACCTGTAGTAATGAAACAACCTTGTCAAAGATGGATGACATTGGGGAAAAGTTTGACGAAATGTTGCAGTCAATAAAAGAACAAGTCAGTTGTGAACTGAAAGAAAAACTGAATGGGAAATCTCCAACTGACAAGGAATTGAATCCAGGATTTGTTGTTGCTTTTGACAACATAGACCTGAGAATAAAGTGCAGAGACATGACCATGTCCAACCAAAATCAGGACACCCATTGGGTAAACCACAGTCTTctcatcactccctgggaaagtgcaagtgagagaacaaggcgttattacatacgcaaggctgggcaaggtgtgacagctgttctccaggatatcgcaccaaacgattctgcaccacttttccagggcatgtgttcttccaaaagtatccatctctctttatctacggacgatgattctaacgatgatacagcccttgatgaaacactaattgaagctcttgctgagtgctacaatgctgccagttgctgggaaacaagacggcaaattctctcagtgatggccgacaaactatcattcaaacgactgcagcgctggatcccagatttaaccaaacatcgatatactgaagctaaacgccattgcctaatacatggcaggggagtgcccatacagtcaactcccactcctagaatgagagttcctacaacccaaatcgatcatttcatcgcgtttattacaagctctcatgttatacaagatctgccattcggggagcgaacaatcactctgtcaacaaaagaaaccatcaaagttcctaacgtcatacgaacactattacctgaaagaatagtaaagcagtatacatcttattgtgaagagtcaggattcacggccatagggcgtagtacattgctgcgcattctgaaaacttgtgcagcgtctgtaaggaagtcgttacaaggacttgattatataagttcttcagggactgaagcgttcgaggacctgttagaagttacggaaactcttggagatatcggacaaggaatgggatgggccaagagacaacaacttcgacttcgtgaaagcaagcgctacctgaaaagcgactataaggtacatgtgtctaaaaggtcaactgtagcagatcactgcagagactacgccctcagcgatccaaaggagcctgcgtttcagtctagttgcgatcatgaacacactgacatatgtgaccgctgtgaaatgctaagtgcagtgattcaagaaatcgaggctgagctggctttacaaaatgacaacatgtcgtctgtgttgagggaacaactttcttacaaagtgaaacaagcaaaaaccacgatcttggcgtggaaatcacatcttctgcgctccgtaaaccaggatgctgctcgtgtagaggtattggagtctttagatgcgtcatctgttctgctggtacaagactgtgcaatgaagtacttgccagaaaatacagagagagccagaccaactggtttgggaaacgtggcattccatggcatgttaccgtag

Transcript

alvinactis_v1_g8076

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33845	C2H2-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan