Gene detail

Detailed information of alvinactis_v1_g9334 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_4:23365741...23372459
NR annotation: XP_028519550.1, syntaxin-8 isoform X1 [Exaiptasia diaphana]
Species abbreviation AIDSS · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UNK0	Syntaxin-8 OS=Homo sapiens OX=9606 GN=STX8 PE=1 SV=2
Q3T075	Syntaxin-8 OS=Bos taurus OX=9913 GN=STX8 PE=2 SV=1
O88983	Syntaxin-8 OS=Mus musculus OX=10090 GN=Stx8 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005673 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05739 all species →	SNARE	SNARE domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000727 all species →	Domain	Target SNARE coiled-coil homology domain	Interproscan
IPR045242 all species →	Family	Syntaxin	Interproscan
IPR041875 all species →	Domain	Syntaxin-8, SNARE domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19957 all species →	SYNTAXIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000149 all species →	Molecular Function	SNARE binding	Interproscan
GO:0005484 all species →	Molecular Function	SNAP receptor activity	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0006906 all species →	Biological Process	vesicle fusion	Interproscan
GO:0012505 all species →	Cellular Component	endomembrane system	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0031201 all species →	Cellular Component	SNARE complex	Interproscan
GO:0048278 all species →	Biological Process	vesicle docking	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08501	STX8; syntaxin 8	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.