Gene detail

Detailed information of alvinactis_v1_g9493 in Alvinactis idsseensis sp. Nov.

Genomic Location: chr_4:25534668...25538263
NR annotation: XP_031564060.1, fatty acid synthase-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

alvinactis_v1_g9493

ATGAATGTTTACAAAAACGGAAAACTTGGTAGCTACCGTCATTTGCCGATGGTCCATGGAGAATCCCAGAACGAGGAAACAGAGCATGCTTACGTCAATGTTCTAACTCGCGGTGACTTGTCTTCTCTTCGTTGGATTGCCTCACATTTGAAGTACGCACCAGGAAAAGAGGGCAACACCGAACTCTGCTCAGTCAATTATGCATCCTTGAACTTCCGTGACATTATGTTGGCAACAGGAAAGCTACCACCAGATGCACTACCTGGTGACCTCGCACAGCAAGACTGCATTCTTGGAATGGAATTCTCTGGAAGAAACCAGAGCGGAAAACGCATCATGGGCCTGCTTCCAGCGCAAGCGTTGGCGACCACCGTCTTGGCTGATCAGAGGTTCACATGGGAGGTTCCTGACAGTTGGAGCCTTTTGGAAGCAGCATCGGTCCCAGTGGTATACTCCACTGCCTACTACGCATTAATGGTCCGTGGAAATCTCCGACCAGGGCAGTCTGTACTTATTCATTCTGGTTCAGGAGGCGTTGGTCAAGCTGCCATCTCGATCTGCTTGACCATGGGCTGCGAAGTGTACACCACTGTGGGATCCAAGGAAAAGAGGAACTACCTTTTGGATAGGTTCCCAAAGCTCAAGAACGAGAATATTGGAAATTCCCGCGACGTTACCTTCGAACCCATGGTGATGCATGGCACTAGCGGTCGTGGCGTAGACCTTGTTCTCAACTCCCTTGCAGAGGAAAAGCTTCAAGCAAGCCTTCGTTGTCTGGCCAGACATGGTCGCTTCCTGGAGATTGGCAAGTACGACTTGTCCAACAACACACCCCTTGGTATGGCCCTTTTCCTGAGAAACGTTTCATTCCATGGAATACTCTTGGACGCCATTTTTGAGGAAGGTAATCCAGAATGGAAAGAGGTCTCGGATCTTGTTACTGCTGGCATTGCATCAGGTGCTGTTCGTACTCTCAAGACATCTCTCTTCGACCGCGATGAAATCGAGCCGGCGTTCCGTTTCATGGCGCAAGGAAAACACATCGGAAAAGTTGTAATTCAAGTGAGACCCGAGAAGGAGTCTAGTTCTGTCGTCAAGCTTGTTGCCCATGCACGAAGCATGTGTGACCCCAAAAAGAGTTACGTCATCACAGGTGGACTTGGAGGCTTTGGACTCGAGTTGGCACATTGGTTGGTGGAACGAGGGGCGAGAAACTTGGTCCTCACAAGCAGAAGAGGTATTCGCACTGGTTATCAGGCACGTAGGGTTCAGGTATGGCAAGATCAAGGAGTACAAGTCAAGATCTCTACTAGCGACGTTGGTACCGAAGAAGGTACTCAAGCTATCATCAAAGAAGCCCAAGCACTTGGAAAACTCGGTGGTGTATTCCACCTTGCAGTGGTCCTACGAGACGGTATGTTCGAGAACCAAACACCTACTGCATTCCAAGAAGTCTGCAAACCAAAATACCATGGTACCATCTATCTGGACAACCTCACGCGACAGGCAGCCATTACCAAAGACTTGCACTGGTTCGTGGTGTTTTCATCAGTGTCTAGTGGTCGTGGAAATGCTGGCCAATCCAACTACGGTTTTGCCAACTCTGGTATGGAGCGCATCTGTGAAAAGCGAGTGGAAGATGGTCTTCCTGGATTGGCCATTCAGTGGGGTGCTATTGGAGACGTAGGTTTGATTCAGGACACGATGGGAGGCTCAAATGATACCGTCATCGGTGGCACACTACCACAGCGCATGAGCAACTGTCTGTCTGTGCTGGACAGGTTTTTATCACAGACGCACCCAGTAATGTCAAGCTTCGTATTGGCTGCTAAGCACTCGTCAAAGGGTGACAAAGGCTCCGGCGGCGATCTCGTCGGTGCAGTAGCAAGGATCCTTGGAGTAAGCGATGTAGAAACGATTAATCCTGACACTACACTGGCTGACCTTGGTCTTGATTCTTTGATGGGCGTAGAAGTCCGACAGACCCTGGAGCGAGACTATGATATCCAGTTAGCAATGAAAGAAGTTCGATTGCTGACAATCAACTCCCTCCGTGACCTATCAAGTGGTGGAGCCTCAAAGACAGAAAACGAGCCAACAGAAGCAAAACAAGTCGACAAGGTCGAAGTGATCGGTAGTCAAGTTATCCCTCACTTCAGCGACAAGACTCTAATCAACCTGAACGACGTCAACAACGGCCAGAAACCTTTGTTCGTGTTGCACAACATCAACGGATCGGTAGAACCTCTCGAATCCTTGGCATCTGCCTTGAGCTGTCCAGTGATTGGTTTACAATACACGACAGATGCTCCAAGCGACTCGATCCAGTCCCTTGCAGCATTCTACATCAAACAGATCAGGGAGATGGTCCCACGTGGTCCTTACTACATATCAGGGTACTCGTTTGGCGCTTGCGTAGCTCTAGAGATGTCGATTCAGTTGGAGAAGACGAAGGAGGTCGAGAGTCTGGTCCTGATGGATGGCTCACAAGAGTACGTGGCCGCGCACACCATGTGGCATCGAAAACGACTGACGGTGGAGGAGGATTCTTGGAAACCCGAGGCTGTTGCTGAGGCGTTATGTATCTTGGCGAGCCACTATGCCAAAGTAGACAAGATAAAACTAATGGAGTCCATCCAGTCTTTATCGTCTATTGAAACCAACTAA

Transcript

alvinactis_v1_g9493

Protein

Uniprot

Uniprot term	Description
P12276	Fatty acid synthase OS=Gallus gallus OX=9031 GN=FASN PE=1 SV=5
P19096	Fatty acid synthase OS=Mus musculus OX=10090 GN=Fasn PE=1 SV=2
P12785	Fatty acid synthase OS=Rattus norvegicus OX=10116 GN=Fasn PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08659	KR	KR domain	Family	Interproscan
PF13602	ADH_zinc_N_2	Zinc-binding dehydrogenase	Domain	Interproscan
PF00975	Thioesterase	Thioesterase domain	Domain	Interproscan
PF00550	PP-binding	Phosphopantetheine attachment site	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011032	Homologous_superfamily	GroES-like superfamily	Interproscan
IPR029058	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR009081	Domain	Phosphopantetheine binding ACP domain	Interproscan
IPR020843	Domain	Polyketide synthase, enoylreductase domain	Interproscan
IPR013968	Domain	Polyketide synthase, ketoreductase domain	Interproscan
IPR050091	Family	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR001031	Domain	Thioesterase	Interproscan
IPR036736	Homologous_superfamily	ACP-like superfamily	Interproscan
IPR006162	PTM	Phosphopantetheine attachment site	Interproscan
IPR020806	Domain	Polyketide synthase, phosphopantetheine-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43775	FATTY ACID SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0004312	Molecular Function	fatty acid synthase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0009058	Biological Process	biosynthetic process	Interproscan
GO:0031177	Molecular Function	phosphopantetheine binding	Interproscan