Detailed information of amic_s0001.g136.t1 in Acropora microphthalma

Genomic Location: sc0000001_pilon:1868624...1916537
NR annotation: CAH3046881.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
M9NDE3Protein bark beetle OS=Drosophila melanogaster OX=7227 GN=bark PE=1 SV=1
Q9NYQ6Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens OX=9606 GN=CELSR1 PE=1 SV=1
A1L4H1Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D OS=Homo sapiens OX=9606 GN=SSC5D PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF00094VWDvon Willebrand factor type D domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR001846Domainvon Willebrand factor, type D domainInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR001190DomainSRCR domainInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR053243FamilySeptate junction maturation regulatorInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47653PROTEIN BARK BEETLEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan

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