Detailed information of amic_s0002.g186.t1 in Acropora microphthalma

Genomic Location: sc0000002_pilon:2407978...2429662
NR annotation: XP_044169062.1, cleavage and polyadenylation specificity factor subunit 2-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q10568Cleavage and polyadenylation specificity factor subunit 2 OS=Bos taurus OX=9913 GN=CPSF2 PE=1 SV=1
O35218Cleavage and polyadenylation specificity factor subunit 2 OS=Mus musculus OX=10090 GN=Cpsf2 PE=1 SV=1
Q9P2I0Cleavage and polyadenylation specificity factor subunit 2 OS=Homo sapiens OX=9606 GN=CPSF2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16661Lactamase_B_6Metallo-beta-lactamase superfamily domainDomainInterproscan
PF13299CPSF100_CCleavage and polyadenylation factor 2 C-terminalFamilyInterproscan
PF07521RMMBLZn-dependent metallo-hydrolase RNA specificity domainMotifInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035639DomainCPSF2, metallo-hydrolase domainInterproscan
IPR036866Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR001279DomainMetallo-beta-lactamaseInterproscan
IPR027075FamilyCleavage and polyadenylation specificity factor subunit 2Interproscan
IPR025069DomainCleavage and polyadenylation specificity factor 2, C-terminalInterproscan
IPR011108DomainZn-dependent metallo-hydrolase, RNA specificity domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45922CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005847Cellular ComponentmRNA cleavage and polyadenylation specificity factor complexInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan
GO:0006398Biological ProcessmRNA 3'-end processing by stem-loop binding and cleavageInterproscan
GO:0098789Biological Processobsolete pre-mRNA cleavage required for polyadenylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14402CPSF2, CFT2; cleavage and polyadenylation specificity factor subunit 2-Messenger RNA biogenesisko03019deepkoala

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