Detailed information of amic_s0002.g453.t1 in Acropora microphthalma

Genomic Location: sc0000002_pilon:6036239...6062731
NR annotation: XP_044175923.1, LOW QUALITY PROTEIN: uncharacterized protein LOC114952642 [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q5F363Protein Jumonji OS=Gallus gallus OX=9031 GN=JARID2 PE=2 SV=1
Q92833Protein Jumonji OS=Homo sapiens OX=9606 GN=JARID2 PE=1 SV=2
Q62315Protein Jumonji OS=Mus musculus OX=10090 GN=Jarid2 PE=1 SV=1
Gene familySubfamily
Transcription Factors FamilyARID

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02928zf-C5HC2C5HC2 zinc fingerDomainInterproscan
PF02375JmjNjmjN domainFamilyInterproscan
PF02373JmjCJmjC domain, hydroxylaseDomainInterproscan
PF01388ARIDARID/BRIGHT DNA binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004198DomainZinc finger, C5HC2-typeInterproscan
IPR001606DomainARID DNA-binding domainInterproscan
IPR036431Homologous_superfamilyARID DNA-binding domain superfamilyInterproscan
IPR003349DomainJmjN domainInterproscan
IPR003347DomainJmjC domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10694LYSINE-SPECIFIC DEMETHYLASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0010468Biological Processregulation of gene expressionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11478JARID2, JMJ; protein Jumonji-Chromosome and associated proteinsko03036deepkoala

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