Gene detail

Detailed information of amic_s0003.g149.t1 in Acropora microphthalma

Genomic Location: sc0000003_pilon:3001081...3004359
NR annotation: XP_029197268.1, metalloproteinase inhibitor 1-like [Acropora millepora]
Species Acropora microphthalma · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P39876	Metalloproteinase inhibitor 3 OS=Mus musculus OX=10090 GN=Timp3 PE=1 SV=1
P48032	Metalloproteinase inhibitor 3 OS=Rattus norvegicus OX=10116 GN=Timp3 PE=2 SV=1
Q9TUL9	Metalloproteinase inhibitor 3 OS=Equus caballus OX=9796 GN=TIMP3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000880 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00965 all species →	TIMP	Tissue inhibitor of metalloproteinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008993 all species →	Homologous_superfamily	Tissue inhibitor of metalloproteinases-like, OB-fold	Interproscan
IPR001820 all species →	Family	Protease inhibitor I35 (TIMP)	Interproscan
IPR001134 all species →	Domain	Netrin domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11844 all species →	METALLOPROTEASE INHIBITOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008191 all species →	Molecular Function	metalloendopeptidase inhibitor activity	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0002020 all species →	Molecular Function	protease binding	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0010033 all species →	Biological Process	obsolete response to organic substance	Interproscan
GO:0010951 all species →	Biological Process	negative regulation of endopeptidase activity	Interproscan
GO:0031012 all species →	Cellular Component	extracellular matrix	Interproscan
GO:0051045 all species →	Biological Process	negative regulation of membrane protein ectodomain proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0003.g149.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.