Gene detail

Detailed information of amic_s0004.g131.t2 in Acropora microphthalma

Genomic Location: sc0000004_pilon:1922032...1967312
NR annotation: XP_015773954.1, PREDICTED: uncharacterized protein LOC107352136 [Acropora digitifera]
Species abbreviation AMICR · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

amic_s0004.g131.t2

ATGCGGACGGAGCTACAAGAATTCAAACTTACATCTTTTCAAAACGGCCTCGAACTGTTGCCAGTTCTAAATATGTTGGACAAAAGAATTGGCATCATTGACTTTAGAGATCGCTGCATAGTCCACCTTGGTGTCCAAACAGATAAAAACAAAACAGATGAATCCGAATTCATAGACATCACAAATTTCGAGAATACCAAATTGGGAGAGAAACTACGCACAGAATTTCTTCATGCAGGATTTGCTGATCTCAGGTTGGGAAAATACAAACCTCTTCCATGTGCGGCTGGGACCCATGTTGGTCCAGGGACAGATTATAAGTGCAAGAAATGCCCTGCAGGTGGCTATTACTCAGACACTGTGGCCCACGTAAGCGATAGTTGCACCAGGTGTCCCAATCGTACTTACGTTGACGTCAAGTATTCACCTGGAACAAATCGAATAGCATGTGTCGCTTGCCCTCAAGGGACTGCAGAGCAAGATACTATATCTTCAACATTCCGGGCCTGTTCATGTCTAGAGGATTTCTATAGAAGAGACATGTTTGATTCCTGTTTTGCTTGTCCGCCTGATATCTATGGAATCGTATGCAAGAATGATATCTACCAACCTAGATTCGGACACTGGTGGAAATTTTTAAACGATACTAACAGGCAACTTTATAAAAGGTTCACGGATAATCTATTTAGCGATGATTTTGTGGTAAAGGGAGACGTGACTCATTATTTCGGACCTTTTCCTCGACAGAATCAGTGTTTTAGTAACAAATCTTGTGAGGCAGGTCCAATGTCCATCTGTCGTAAAGGCCATGAAGGACCATTGTGTGACGTTTGTAAATCGGGGTATTACAAACAGTTGAAGTTGTGCTACAAGTGTCCATCAAAGGAACGGATAATAGGGGAACTCTCTTTAATAGCTGCAGTAATTATCCTAATTACAATGGTTGTGGTTTGGAGAAAAAAGAAGCAAAATATGAAGAAACAGCACCGCTCCTTTCTCGATCGCATTCTCAGTAGAATGAAAATTATAGTTGGTTTTTACCAAGTCACGTTTGGAGTTGTTGACGCATTTTCATACATCGAATGGCCGGACGCCCTTGCAGAATTTGGAGTTTATTTTGACTTGTTACAGCTTAACATCTTCCAGATTGCTCCGCTGAATTGTGTCTTTCCAAAGCTCGAAATGAATGCTTTTAAAAGATTGTATGCTTTGCTCATTGTGAATGGTGGGGTAGTCGTTTTGGCGTTCCTTGTTTATGGCCTTTGGAGGGTCTTACTGATCTGCGCCAGCCAAGAGAAAAAAGCAAAGAAAATTTCGCAAGCAAAGCAGACGGTGTACACAGCAGTGTTTGTGGTTTTTTATATTACATACCTGAGCACCTGCTCGAGCACAGCAAATATTAACCCACTTGCTTGTTACCAAGTTTGCTACGACGAAAATAAAACCGTTTGTAATATGTTTCTGAAGGGTGATTTCAGCGTCGATTGTGAAAGAGAAGAATTCCGTAAATATCATTTTGTTGGATACCTCACTGTCATCTACATCGCGTTTCTACCCACAGCAGCACTGTTCATTCTTTGGAGACAGAGACAAGCCCAAATGTTATCCGTTGGTCAAAGCCCAGGTACATTCATCTCAACGAAAAAAAAATCCTCAAGTTCAGACCTCGCCAATGGATTGAGATTTTTGCATGAAAATTACCGCGGTGAATTTTGGTATTGGGAATTTGTTGAAACAGCACGAAAAGTCGCACTTACATCGGGTATTATCCTGGTAGGAAAAAAAAGCAGAGCTTACATTGGGGTAGTTTGTGGTTTTTCAGGCCTCTATGGTATGTACGTTGCGCACGCGGTGCCCTTAGTGGATTACTCCGAGTACACTTTGATGGTGGTTAACCTTGCTGTAACCTTCTTCAACCTTGGAATAGGAACTAGCGGTAAAATCCCAGCAGAAGAAGCAAGAAATCTCAAGGAATCATTCATGGACCACATGGCATTCCAAGTAATTGTGATTGCAGCAAATTTCAGTGTTGTTGGACTTCTTTTTTaccaatacggtgaaaacaattggctctatttcaagcagtggcgaaaaaccaaggaaaaatggtcactttcatgtttactggagatgctcgtgcctttaggtgacctggagagcgagttacaaaaaatggcagaaaaaatcccacccgaacagcaaaaccaaaagagtgttaatcccatcttatcatcgctgtctgCGATGATAAGGGACATTGCAAGCATCCGTTTGGAGTTTGGCAGTCGTGATCGCCTCACGGATGAGAGCAGCGAACCCCCATCAGTTAACTTTGAATCTGGAGAAAGCGAAACCGATGAAATGGAAGGAGCAAGTTCTGACGATGTGGCACCTGGCATTGGAAAAGAATTGAACAAACAATCTGTTAACTTTGAATCTGGAGAACGGAGTGAAACCGAGGAAATGGAAGCAGAAAATTCTGACGATGCAGCACCTGACATTGGAAAAGAATTGAACAAACTATTTCTTAACTTTGAATCTGGAGAACGGAGTGAAACCGAGGAAATGGAAGCAGAAAATTCTGACGATGCAGCACCTGACATTGGAAAAGAATTGAACAAACAATTTCTTAACTTTGAATCTGGGGAACGGAGCGAAACCGAGGAAATGGAAGGAGAAACTTCTGACGATGCGGCACCTGACATTGGAAAAGAATTGAACAAAAAATCTGCGCGGGAAACGTGGCTTTTGAGAAAGATGCCAAACATTAAGATATTTGGTGGAAACTCTCATCAGCAGCTGGCCAAATTAATTTCAGAACGACTTGGAAATGATCTGGGAAAATGTGTCTTAAAAAAGTTCTCCAACAAGGAAACTAGTGTGGAAATAGGTGAATCAGTCAGAGGTGAAGATGTTTTTATTGTTCAGAGTGGGTGTGGTGATATCAACGATAACTTAATGGAACTACTTATCATGATAAATGCGTGCAAGATTGCATCATCACAGCGTGTCACGGCCGTGATTCCATGCTTCCCTTATGCAAGACAGGATAAGAAAGACAAGAGTCGAGCACCAATTTCCGCCAAGCTGGTGGCCAATATGTTATCAGTGGCTGGGGCAGACCACATCATAACCATGGATTTACATGCATCCCAGATACAGGGTTTCTTTGACATACCTGTTGATAATTTGTACGCTGAACCAGCTGTTTTAAAATGGATCAAAGAGCACATCTCTGACTGGCAGCAATCTGTCATCGTGTCGCCAGATGCAGGAGGTGCTAAAAGAGTGACAGCAATCGCCGATCATCTCAACGTGGGTTTTGCCTTAATCCACAAGGAGCGAAAAGTTGCCAATGAAGTGGCGAGTATGGTTCTTGTTGGAGATGTTAAGGACCGCACAGCAATTCTTGTGGATGATATGGCCGACACCTGTGGGACACTCACCTTAGCTGCACAAAAACTGAAAGATGCTGGTGCTGCAAAAGTGTATGCCATTTTGACACATGGTATCTTTTCTGGGCCTGCTCTGCGGAGAATAGAAGAAAGTGATCTTGAAGCGGTTGTAGTTACTAATACCATCCCACAAGACAGCAAGATGCAAAACTGTGCTAAAATCAAGTGTATCGACATCTCTATGATCCTCTCAGAAGCTATCCGCAGGACACACAATGGCGAATCAGTGTCATACCTGTTCAACAACGTACCTCTGTAG

Transcript

amic_s0004.g131.t2

taatagttatgacataataaaCATATACTCTTTTTGTATAGACTGAAATGCTGGGAGTGATTGCAATAATAACAACAATAGAGTGACTATTGCGTTCGAACGAAGAGAAAAACTTTCACTGACTTTTCCAATTTGAAATTTTCTTGGTGATTGACAACTGGCCTCGAATTGATGGGAAGCCTCGAGCCCACGAGGTGTGACGTAATGAACAAAATATTAAAGGCTCACAATATGTCAAGTTTACAGCCGGGTTACAGGGCAACGTGAGCAAATTGGTGGAATGAGAGTGTTTGTTTTGCGTTTTTCTCCTCGAGCAATAAACAAGATATTGCACGATTTGCTCATACAAGTTGGCCAACGACTTGGCGTCAACAGTTGagggagcttaagcagccacgaaggcaacagcaacgaaaacgtcacttgaaaatgaacattcgggaaatggtgaatattttgtgattatactgcatgCCTTTTAAACGTGATTTTATTGCTAAATGTGTCGTAGGATAAACATCAGACTATTACTGATTGCATGTTATAATAACCCGATACCCTTCAATCCTCTGCGGGAATGTAAGGGAAAGGCATGCTTCGAGGCGACTGAACCTTCCAAAAGCGGGAATTAGGACCACACAAAAAAAGTCGCTATGCTGTGAGACCATCGATTCGTCCTTTGAAGAGCTGGAACTTCTTAGGACAGATGTTTCTCCCCTTAATATAAGGACAAGAAAAGGTTTGTATCAAGTCTCTAACAGCGAAAACATCACTTCTCCGACGATCAGAGAGATTGTTCGTCATTTCATGTGCATTGCTTATTACAATAATATCTTTATTGAAAAGCTTGTTGGTGCAAATGCTGAGGCAAATTTAATCATAATTAAGTTACCTCGAGGATGGGAGGCCTATGGATTCTTGTAGTGATCGTACTTTCCCCAGCTGTAACCAGTGGCAACCAGAGCAAAGGTATTGTAGTCCCATTTGGAGCTGAAATTAGAACAGTGTCATCACATTTAGTAAAATGCGTATTCGAAGTGGGGTCAAACATGTCATCAATCATGGATAACTCATCTGGTATGGTTGCTGAAGGTGCTGATGTGGTATGGAGCATAATACGCCAGAAGGGTAATTACACTTGCAAAGCTAGGGATTCGCTGGGACATGTATCAGCATCAAAGACGTTTTATGTTAGAGTTGTTGATTTCTTAACAACAACAGTATTGAAGAAATCGGTGCCGGAACTTTTCGGGATTTGGAGAATCTTCAATACATAGTTCTTTCTGACAACCCTATCAAAACTCTTGGAGATCAGGCGTTTTCTATTCATAGGGAAAAATTGAGAATATTCCTGATGCGGACGGAGCTACAAGAATTCAAACTTACATCTTTTCAAAACGGCCTCGAACTGTTGCCAGTTCTAAATATGTTGGACAAAAGAATTGGCATCATTGACTTTAGAGATCGCTGCATAGTCCACCTTGGTGTCCAAACAGATAAAAACAAAACAGATGAATCCGAATTCATAGACATCACAAATTTCGAGAATACCAAATTGGGAGAGAAACTACGCACAGAATTTCTTCATGCAGGATTTGCTGATCTCAGGTTGGGAAAATACAAACCTCTTCCATGTGCGGCTGGGACCCATGTTGGTCCAGGGACAGATTATAAGTGCAAGAAATGCCCTGCAGGTGGCTATTACTCAGACACTGTGGCCCACGTAAGCGATAGTTGCACCAGGTGTCCCAATCGTACTTACGTTGACGTCAAGTATTCACCTGGAACAAATCGAATAGCATGTGTCGCTTGCCCTCAAGGGACTGCAGAGCAAGATACTATATCTTCAACATTCCGGGCCTGTTCATGTCTAGAGGATTTCTATAGAAGAGACATGTTTGATTCCTGTTTTGCTTGTCCGCCTGATATCTATGGAATCGTATGCAAGAATGATATCTACCAACCTAGATTCGGACACTGGTGGAAATTTTTAAACGATACTAACAGGCAACTTTATAAAAGGTTCACGGATAATCTATTTAGCGATGATTTTGTGGTAAAGGGAGACGTGACTCATTATTTCGGACCTTTTCCTCGACAGAATCAGTGTTTTAGTAACAAATCTTGTGAGGCAGGTCCAATGTCCATCTGTCGTAAAGGCCATGAAGGACCATTGTGTGACGTTTGTAAATCGGGGTATTACAAACAGTTGAAGTTGTGCTACAAGTGTCCATCAAAGGAACGGATAATAGGGGAACTCTCTTTAATAGCTGCAGTAATTATCCTAATTACAATGGTTGTGGTTTGGAGAAAAAAGAAGCAAAATATGAAGAAACAGCACCGCTCCTTTCTCGATCGCATTCTCAGTAGAATGAAAATTATAGTTGGTTTTTACCAAGTCACGTTTGGAGTTGTTGACGCATTTTCATACATCGAATGGCCGGACGCCCTTGCAGAATTTGGAGTTTATTTTGACTTGTTACAGCTTAACATCTTCCAGATTGCTCCGCTGAATTGTGTCTTTCCAAAGCTCGAAATGAATGCTTTTAAAAGATTGTATGCTTTGCTCATTGTGAATGGTGGGGTAGTCGTTTTGGCGTTCCTTGTTTATGGCCTTTGGAGGGTCTTACTGATCTGCGCCAGCCAAGAGAAAAAAGCAAAGAAAATTTCGCAAGCAAAGCAGACGGTGTACACAGCAGTGTTTGTGGTTTTTTATATTACATACCTGAGCACCTGCTCGAGCACAGCAAATATTAACCCACTTGCTTGTTACCAAGTTTGCTACGACGAAAATAAAACCGTTTGTAATATGTTTCTGAAGGGTGATTTCAGCGTCGATTGTGAAAGAGAAGAATTCCGTAAATATCATTTTGTTGGATACCTCACTGTCATCTACATCGCGTTTCTACCCACAGCAGCACTGTTCATTCTTTGGAGACAGAGACAAGCCCAAATGTTATCCGTTGGTCAAAGCCCAGGTACATTCATCTCAACGAAAAAAAAATCCTCAAGTTCAGACCTCGCCAATGGATTGAGATTTTTGCATGAAAATTACCGCGGTGAATTTTGGTATTGGGAATTTGTTGAAACAGCACGAAAAGTCGCACTTACATCGGGTATTATCCTGGTAGGAAAAAAAAGCAGAGCTTACATTGGGGTAGTTTGTGGTTTTTCAGGCCTCTATGGTATGTACGTTGCGCACGCGGTGCCCTTAGTGGATTACTCCGAGTACACTTTGATGGTGGTTAACCTTGCTGTAACCTTCTTCAACCTTGGAATAGGAACTAGCGGTAAAATCCCAGCAGAAGAAGCAAGAAATCTCAAGGAATCATTCATGGACCACATGGCATTCCAAGTAATTGTGATTGCAGCAAATTTCAGTGTTGTTGGACTTCTTTTTTaccaatacggtgaaaacaattggctctatttcaagcagtggcgaaaaaccaaggaaaaatggtcactttcatgtttactggagatgctcgtgcctttaggtgacctggagagcgagttacaaaaaatggcagaaaaaatcccacccgaacagcaaaaccaaaagagtgttaatcccatcttatcatcgctgtctgCGATGATAAGGGACATTGCAAGCATCCGTTTGGAGTTTGGCAGTCGTGATCGCCTCACGGATGAGAGCAGCGAACCCCCATCAGTTAACTTTGAATCTGGAGAAAGCGAAACCGATGAAATGGAAGGAGCAAGTTCTGACGATGTGGCACCTGGCATTGGAAAAGAATTGAACAAACAATCTGTTAACTTTGAATCTGGAGAACGGAGTGAAACCGAGGAAATGGAAGCAGAAAATTCTGACGATGCAGCACCTGACATTGGAAAAGAATTGAACAAACTATTTCTTAACTTTGAATCTGGAGAACGGAGTGAAACCGAGGAAATGGAAGCAGAAAATTCTGACGATGCAGCACCTGACATTGGAAAAGAATTGAACAAACAATTTCTTAACTTTGAATCTGGGGAACGGAGCGAAACCGAGGAAATGGAAGGAGAAACTTCTGACGATGCGGCACCTGACATTGGAAAAGAATTGAACAAAAAATCTGCGCGGGAAACGTGGCTTTTGAGAAAGATGCCAAACATTAAGATATTTGGTGGAAACTCTCATCAGCAGCTGGCCAAATTAATTTCAGAACGACTTGGAAATGATCTGGGAAAATGTGTCTTAAAAAAGTTCTCCAACAAGGAAACTAGTGTGGAAATAGGTGAATCAGTCAGAGGTGAAGATGTTTTTATTGTTCAGAGTGGGTGTGGTGATATCAACGATAACTTAATGGAACTACTTATCATGATAAATGCGTGCAAGATTGCATCATCACAGCGTGTCACGGCCGTGATTCCATGCTTCCCTTATGCAAGACAGGATAAGAAAGACAAGAGTCGAGCACCAATTTCCGCCAAGCTGGTGGCCAATATGTTATCAGTGGCTGGGGCAGACCACATCATAACCATGGATTTACATGCATCCCAGATACAGGGTTTCTTTGACATACCTGTTGATAATTTGTACGCTGAACCAGCTGTTTTAAAATGGATCAAAGAGCACATCTCTGACTGGCAGCAATCTGTCATCGTGTCGCCAGATGCAGGAGGTGCTAAAAGAGTGACAGCAATCGCCGATCATCTCAACGTGGGTTTTGCCTTAATCCACAAGGAGCGAAAAGTTGCCAATGAAGTGGCGAGTATGGTTCTTGTTGGAGATGTTAAGGACCGCACAGCAATTCTTGTGGATGATATGGCCGACACCTGTGGGACACTCACCTTAGCTGCACAAAAACTGAAAGATGCTGGTGCTGCAAAAGTGTATGCCATTTTGACACATGGTATCTTTTCTGGGCCTGCTCTGCGGAGAATAGAAGAAAGTGATCTTGAAGCGGTTGTAGTTACTAATACCATCCCACAAGACAGCAAGATGCAAAACTGTGCTAAAATCAAGTGTATCGACATCTCTATGATCCTCTCAGAAGCTATCCGCAGGACACACAATGGCGAATCAGTGTCATACCTGTTCAACAACGTACCTCTGTAGAATAATGAGAACTTGGTCATCTCGCTCGGCACCTGAATGATTCGCCACAAGCACTTCGCTACCACCACGATCTTATCAGGCAGTAACTACTGAGAACTTGGAAGCGAGTTGTCCACTACCCAATGAGAGGCGGTTTGTACAAAGGAATTTAGAGATAAAAAGATCTGACGTCTAGACCAGTGAGTGCAGGGTACAATTTGGATAATAAATAATTTGTTTGGATTGCAAGTCTTGGGGCATGGTGACGTCCTGAACGATGCAGATTATCCAAGTGGGATGAGAAAAATCCTGAAAACTATTTTCGTAATTATAGCACTTTAAATTGGAAAAGAGATGATAGTTTACAGCGCATCAGTGATAATGTCCGTTCCCTATTGCGTATATTCATATCAAGCGCTGATGTCGCTTAAATTAACAACAGTTTGTAGGAACCTGTCTATATTTTAATGTCTGTGATTGATTTGTTATCTTTGGTAAGTACAACAGTCGCGGCAAACAAAGAAAAGCAGATGTAGTTTTCAACAAAGTTTTTCAGTAGCT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5XGI0	Ribose-phosphate pyrophosphokinase 2 OS=Xenopus tropicalis OX=8364 GN=prps2 PE=2 SV=1
Q2HJ58	Ribose-phosphate pyrophosphokinase 1 OS=Bos taurus OX=9913 GN=PRPS1 PE=2 SV=3
P60891	Ribose-phosphate pyrophosphokinase 1 OS=Homo sapiens OX=9606 GN=PRPS1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001449 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13793 all species →	Pribosyltran_N	N-terminal domain of ribose phosphate pyrophosphokinase	Domain	Interproscan
PF14572 all species →	Pribosyl_synth	Phosphoribosyl synthetase-associated domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005946 all species →	Family	Ribose-phosphate pyrophosphokinase	Interproscan
IPR000842 all species →	Conserved_site	Phosphoribosyl pyrophosphate synthetase, conserved site	Interproscan
IPR029057 all species →	Homologous_superfamily	Phosphoribosyltransferase-like	Interproscan
IPR000836 all species →	Domain	Phosphoribosyltransferase domain	Interproscan
IPR029099 all species →	Domain	Ribose-phosphate pyrophosphokinase, N-terminal domain	Interproscan
IPR009030 all species →	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10210 all species →	RIBOSE-PHOSPHATE DIPHOSPHOKINASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0002189 all species →	Cellular Component	ribose phosphate diphosphokinase complex	Interproscan
GO:0004749 all species →	Molecular Function	ribose phosphate diphosphokinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006015 all species →	Biological Process	5-phosphoribose 1-diphosphate biosynthetic process	Interproscan
GO:0006164 all species →	Biological Process	purine nucleotide biosynthetic process	Interproscan
GO:0009165 all species →	Biological Process	nucleotide biosynthetic process	Interproscan
GO:0009156 all species →	Biological Process	ribonucleoside monophosphate biosynthetic process	Interproscan
GO:0044249 all species →	Biological Process	obsolete cellular biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for amic_s0004.g131.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.