Detailed information of amic_s0004.g158.t1 in Acropora microphthalma

Genomic Location: sc0000004_pilon:2267363...2276644
NR annotation: CAH3025588.1, unnamed protein product [Porites evermanni]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P61085Ubiquitin-conjugating enzyme E2 K OS=Bos taurus OX=9913 GN=UBE2K PE=1 SV=3
P61086Ubiquitin-conjugating enzyme E2 K OS=Homo sapiens OX=9606 GN=UBE2K PE=1 SV=3
P61087Ubiquitin-conjugating enzyme E2 K OS=Mus musculus OX=10090 GN=Ube2k PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007844 (this species only)
Ubiquitin familyE2|UBC|UBC · all ubiquitin genes in this species
Ubiquitin familyUBD|Alpha-Helix|UBA · all ubiquitin genes in this species
Ubiquitin familyUBD|UBC-like|UBC · all ubiquitin genes in this species
Ubiquitin familyUBD|UBC-like|UEV · all ubiquitin genes in this species
Ubiquitin familyE2|UEV|UEV · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00179
all species →		UQ_conUbiquitin-conjugating enzymeDomainInterproscan
PF00627
all species →		UBAUBA/TS-N domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000608
all species →		DomainUbiquitin-conjugating enzyme E2Interproscan
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR023313
all species →		Active_siteUbiquitin-conjugating enzyme, active siteInterproscan
IPR016135
all species →		Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR015940
all species →		DomainUbiquitin-associated domainInterproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan
IPR009060
all species →		Homologous_superfamilyUBA-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR36696
all species →		AGAP012002-PAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0004.g158.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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