Detailed information of amic_s0004.g45.t2 in Acropora microphthalma

Genomic Location: sc0000004_pilon:498550...512896
NR annotation: XP_029194550.2, uncharacterized protein LOC114960355 isoform X6 [Acropora millepora]
Species abbreviation AMICR · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002137 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF21744
all species →		BAHCC1-like_TudorBAHCC1-like, Tudor domainDomainInterproscan
PF05270
all species →		AbfBAlpha-L-arabinofuranosidase B (ABFB) domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048924
all species →		DomainBAHCC1-like, Tudor domainInterproscan
IPR036195
all species →		Homologous_superfamilyAlpha-L-arabinofuranosidase B, arabinose-binding domain superfamilyInterproscan
IPR007934
all species →		DomainAlpha-L-arabinofuranosidase B, arabinose-binding domainInterproscan

 PANTHER
No PANTHER signature was detected for amic_s0004.g45.t2. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0046373
all species →		Biological ProcessL-arabinose metabolic processInterproscan
GO:0046556
all species →		Molecular Functionalpha-L-arabinofuranosidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for amic_s0004.g45.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP